MirGeneDB 2.1

MirGeneDB ID

Isc-Mir-92

Family name

MIR-92 (all species)

Seed

Species

Deer tick (Ixodes scapularis)

MiRBase ID

Paralogues

Orthologues

Aae-Mir-92-o54 Aae-Mir-92-o55 Aca-Mir-92-P1a Aca-Mir-92-P1c Aca-Mir-92-P2a Aca-Mir-92-P2c Ami-Mir-92-P1a Ami-Mir-92-P1c Ami-Mir-92-P1d Ami-Mir-92-P2a Ami-Mir-92-P2c Asu-Mir-92 Bfl-Mir-92-o1 Bfl-Mir-92-o2 Bfl-Mir-92-o3 Bfl-Mir-92-o4 Bfl-Mir-92-o5 Bfl-Mir-92-o6 Bfl-Mir-92-o7 Bfl-Mir-92-o8 Bge-Mir-92-o63 Bge-Mir-92-o64 Bge-Mir-92-o65 Bge-Mir-92-o66 Bla-Mir-92-o1 Bla-Mir-92-o2 Bla-Mir-92-o3 Bla-Mir-92-o4 Bla-Mir-92-o5 Bla-Mir-92-o6 Bla-Mir-92-o7 Bla-Mir-92-o8 Bta-Mir-92-P1a Bta-Mir-92-P1c Bta-Mir-92-P1d Bta-Mir-92-P2a Bta-Mir-92-P2c Bta-Mir-92-P2d Cbr-Mir-92-o67 Cbr-Mir-92-o68 Cel-Mir-92 Cfa-Mir-92-P1a Cfa-Mir-92-P1c Cfa-Mir-92-P1d Cfa-Mir-92-P2a Cfa-Mir-92-P2c Cfa-Mir-92-P2d Cgi-Mir-92-o32 Cgi-Mir-92-o33 Cgi-Mir-92-o34 Cgi-Mir-92-o35 Cin-Mir-92-o69 Cin-Mir-92-o70 Cin-Mir-92-o71 Cin-Mir-92-o72 Cin-Mir-92-o73 Cin-Mir-92-o74 Cin-Mir-92-o75 Cin-Mir-92-o76 Cin-Mir-92-o77 Cin-Mir-92-o78 Cli-Mir-92-P1a Cli-Mir-92-P1c Cli-Mir-92-P2a Cli-Mir-92-P2c Cmi-Mir-92-P1a Cmi-Mir-92-P1b Cmi-Mir-92-P1c Cmi-Mir-92-P1d Cmi-Mir-92-P2a Cmi-Mir-92-P2b Cmi-Mir-92-P2c Cmi-Mir-92-P2d Cpi-Mir-92-P1a Cpi-Mir-92-P1c Cpi-Mir-92-P1d Cpi-Mir-92-P2a Cpi-Mir-92-P2c Cpo-Mir-92-P1a Cpo-Mir-92-P1c Cpo-Mir-92-P1d Cpo-Mir-92-P2a Cpo-Mir-92-P2c Cpo-Mir-92-P2d Csc-Mir-92-P12 Csc-Mir-92-P13 Cte-Mir-92-o36 Cte-Mir-92-o37 Cte-Mir-92-o38 Dan-Mir-92-P3 Dan-Mir-92-P4 Dan-Mir-92-P5 Dan-Mir-92-P6 Dan-Mir-92-P7 Dan-Mir-92-P8 Dma-Mir-92-o46 Dma-Mir-92-o47 Dme-Mir-92-P3 Dme-Mir-92-P4 Dme-Mir-92-P5 Dme-Mir-92-P6 Dme-Mir-92-P7 Dme-Mir-92-P8 Dmo-Mir-92-P3 Dmo-Mir-92-P4 Dmo-Mir-92-P5 Dmo-Mir-92-P6 Dmo-Mir-92-P8 Dno-Mir-92-P1a Dno-Mir-92-P1c Dno-Mir-92-P1d Dno-Mir-92-P2a Dno-Mir-92-P2c Dno-Mir-92-P2d Dpu-Mir-92-o46 Dpu-Mir-92-o47 Dre-Mir-92-P1a1 Dre-Mir-92-P1a2 Dre-Mir-92-P1d Dre-Mir-92-P2c Dre-Mir-92-P2d Dsi-Mir-92-P3 Dsi-Mir-92-P4 Dsi-Mir-92-P5 Dsi-Mir-92-P6 Dsi-Mir-92-P7 Dsi-Mir-92-P8 Dya-Mir-92-P3 Dya-Mir-92-P4 Dya-Mir-92-P5 Dya-Mir-92-P6a Dya-Mir-92-P6b Dya-Mir-92-P7 Ebu-Mir-92-P1e Ebu-Mir-92-P2e Ebu-Mir-92-P2f Efe-Mir-92-o39 Efe-Mir-92-o40 Esc-Mir-92 Ete-Mir-92-P1a Ete-Mir-92-P1c Ete-Mir-92-P1d Ete-Mir-92-P2a Ete-Mir-92-P2c Ete-Mir-92-P2d Gga-Mir-92-P1a Gga-Mir-92-P1c Gga-Mir-92-P2a Gga-Mir-92-P2c Gja-Mir-92-P1a Gja-Mir-92-P1c Gja-Mir-92-P1d Gja-Mir-92-P2a Gja-Mir-92-P2c Gmo-Mir-92-P1a1 Gmo-Mir-92-P1a2 Gmo-Mir-92-P2c Gmo-Mir-92-P2d Hme-Mir-92-o56 Hme-Mir-92-o57 Hsa-Mir-92-P1a Hsa-Mir-92-P1c Hsa-Mir-92-P1d Hsa-Mir-92-P2a Hsa-Mir-92-P2c Hsa-Mir-92-P2d Lan-Mir-92-o79a Lan-Mir-92-o79b Lan-Mir-92-o80a Lan-Mir-92-o80b Lan-Mir-92-o81 Lan-Mir-92-o82 Lan-Mir-92-o83 Lan-Mir-92-o84 Lan-Mir-92-o85 Lch-Mir-92-P1a Lch-Mir-92-P1d Lch-Mir-92-P2c Lch-Mir-92-P2d Lgi-Mir-92-o28 Lgi-Mir-92-o29-v1 Lgi-Mir-92-o29-v2 Lgi-Mir-92-o30 Lgi-Mir-92-o31 Loc-Mir-92-P1a Loc-Mir-92-P1d Loc-Mir-92-P2c Loc-Mir-92-P2d Lpo-Mir-92-P9 Lpo-Mir-92-P10 Lpo-Mir-92-P11 Mal-Mir-92-P1a1 Mal-Mir-92-P1a2 Mal-Mir-92-P1d Mal-Mir-92-P2d Mdo-Mir-92-P1a Mdo-Mir-92-P1c Mdo-Mir-92-P1d Mdo-Mir-92-P2a Mdo-Mir-92-P2c Mdo-Mir-92-P2d Mml-Mir-92-P1a Mml-Mir-92-P1c Mml-Mir-92-P1d Mml-Mir-92-P2a Mml-Mir-92-P2c Mml-Mir-92-P2d Mmu-Mir-92-P1a Mmu-Mir-92-P1c Mmu-Mir-92-P1d Mmu-Mir-92-P2a Mmu-Mir-92-P2c Mmu-Mir-92-P2d Mun-Mir-92-P1a Mun-Mir-92-P1c Mun-Mir-92-P1d Mun-Mir-92-P2a Mun-Mir-92-P2c Npo-Mir-92-o48 Npo-Mir-92-o49 Npo-Mir-92-o50 Oan-Mir-92-P1a5 Oan-Mir-92-P1a6 Oan-Mir-92-P1a7 Oan-Mir-92-P1a8 Oan-Mir-92-P1c Oan-Mir-92-P1d Oan-Mir-92-P2a Oan-Mir-92-P2c Oan-Mir-92-P2d Obi-Mir-92 Ocu-Mir-92-P1a Ocu-Mir-92-P1c Ocu-Mir-92-P1d Ocu-Mir-92-P2a Ocu-Mir-92-P2c Ocu-Mir-92-P2d Pbv-Mir-92-P1a Pbv-Mir-92-P1c Pbv-Mir-92-P1d Pbv-Mir-92-P2c Pfl-Mir-92-o41 Pfl-Mir-92-o42 Pfl-Mir-92-o43 Pfl-Mir-92-o44 Pfl-Mir-92-o45 Pma-Mir-92-P1g Pma-Mir-92-P1h Pma-Mir-92-P1o1 Pma-Mir-92-P2g Pmi-Mir-92-o21 Pmi-Mir-92-o22 Pmi-Mir-92-o23 Pmi-Mir-92-o24 Pmi-Mir-92-o25 Pmi-Mir-92-o26 Pmi-Mir-92-o27 Rno-Mir-92-P1a Rno-Mir-92-P1c Rno-Mir-92-P1d Rno-Mir-92-P2a Rno-Mir-92-P2c Rno-Mir-92-P2d Sha-Mir-92-P1a Sha-Mir-92-P1c Sha-Mir-92-P1d Sha-Mir-92-P2a Sha-Mir-92-P2c Sha-Mir-92-P2d Sko-Mir-92-o9 Sko-Mir-92-o10 Sko-Mir-92-o11 Sko-Mir-92-o12 Sme-Mir-92 Spt-Mir-92-P1a Spt-Mir-92-P1c Spt-Mir-92-P1d Spt-Mir-92-P2a Spt-Mir-92-P2c Spu-Mir-92-o13 Spu-Mir-92-o14 Spu-Mir-92-o15 Spu-Mir-92-o16 Spu-Mir-92-o17 Spu-Mir-92-o18 Spu-Mir-92-o19 Spu-Mir-92-o20 Sto-Mir-92-P1a Sto-Mir-92-P1b Sto-Mir-92-P1c Sto-Mir-92-P1d Sto-Mir-92-P2a Sto-Mir-92-P2b Sto-Mir-92-P2c Tca-Mir-92-o58 Tca-Mir-92-o59 Tca-Mir-92-o60 Tgu-Mir-92-P1a Tgu-Mir-92-P1c Tgu-Mir-92-P1d Tgu-Mir-92-P2a Tgu-Mir-92-P2c Tni-Mir-92-P1a1 Tni-Mir-92-P1a2 Tni-Mir-92-P2d Xbo-Mir-92-o86 Xbo-Mir-92-o87 Xbo-Mir-92-o88 Xbo-Mir-92-o89 Xbo-Mir-92-o90 Xbo-Mir-92-o91 Xla-Mir-92-P1a3 Xla-Mir-92-P1a4 Xla-Mir-92-P1c3 Xla-Mir-92-P1c4 Xla-Mir-92-P1d1 Xla-Mir-92-P1d2 Xla-Mir-92-P2a Xla-Mir-92-P2c3 Xla-Mir-92-P2c4 Xla-Mir-92-P2d3 Xla-Mir-92-P2d4 Xtr-Mir-92-P1a Xtr-Mir-92-P1c Xtr-Mir-92-P1d Xtr-Mir-92-P2a Xtr-Mir-92-P2c Xtr-Mir-92-P2d

Node of Origin (locus)

Bilateria

Node of Origin (family)

Bilateria

Genome context
(IscaWI)

DS639501: 298034-298092 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

ACGUGCAAAGUUACUCGAUUAGCCUUGGCCAGGUCUGGAUGAGUGCCAAUGUUGCGUAAAUGCUGAAUAUUGCACUCGUCCCGGCCUUUCUCUGGCUUUCUAAGCAACCACUGGAAGCA

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Structure

        10        20          30        40        50         
ACGUGCAAAGUUACUCGAUU--|   UU  CC     U          C      GCGUA 
                      AGCC  GG  AGGUC GGAUGAGUGC AAUGUU     A
                      UCGG  UC  UCCGG CCUGCUCACG UUAUAA     A
ACGAAGGUCACCAACGAAUCUU^   UC  UU     C          -      GUCGU 
       110       100        90        80         70        60

Deep sequencing

Go to detailed chart

3' NTU

No

Motifs

CNNC at 3p(+17)

Tissue expression

-

+

Al	Mi	Mi	Mi	Sa	Sa	Sa	Sa	To

Star sequence

Isc-Mir-92_5p*

mirBase accession

None

Sequence

0- AGGUCUGGAUGAGUGCCAAUGUU -23

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Mature sequence

Isc-Mir-92_3p

mirBase accession

None

Sequence

37- UAUUGCACUCGUCCCGGCCUUU -59

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