MirGeneDB 3.0

SpeciesPrecursor sequencesPrecursors w/flank (+30nt) Mature sequencesStar sequences 5p sequences Loop sequences 3p sequences All sequences Genomic coordinatesCount matrixReads
- All species Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED
Human (Homo sapiens) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Sumatran orangutan (Pongo abelii) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Rhesus monkey (Macaca mulatta) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
White-tufted-ear marmoset (Callithrix jacchus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Gray mouse lemur (Microcebus murinus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
House mouse (Mus musculus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Norway rat (Rattus norvegicus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Guinea pig (Cavia porcellus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Rabbit (Oryctolagus cuniculus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Cow (Bos taurus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Horse (Equus caballus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Dog (Canis familiaris) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Nine-banded armadillo (Dasypus novemcinctus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
African bush elephant (Loxodonta africana) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Lesser hedgehog tenrec (Echinops telfairi) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Gray short-tailed opossum (Monodelphis domestica) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Tasmanian devil (Sarcophilus harrisii) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Tammar Wallaby (Notamacropus eugenii) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Platypus (Ornithorhynchus anatinus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Chicken (Gallus gallus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Rock pigeon (Columba livia) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Zebra finch (Taeniopygia guttata) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
American alligator (Alligator mississippiensis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Western painted turtle (Chrysemys picta bellii) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Green anole lizard (Anolis carolinensis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Burmese python (Python bivittatus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Schlegels Japanese gecko (Gekko japonicus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Tuatara (Sphenodon punctatus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table
Tropical clawed frog (Xenopus tropicalis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
African clawed frog (Xenopus laevis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Microcaecilia (Microcaecilia unicolor) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Coelacanth (Latimeria chalumnae) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table
Asian swamp eel (Monopterus albus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Pufferfish (Tetraodon nigroviridis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Cod (Gadus morhua) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Zebrafish (Danio rerio) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Spotted gar (Lepisosteus oculatus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Australian ghostshark (Callorhinchus milii) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Cloudy Catshark (Scyliorhinus torazame) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Inshore hagfish (Eptatretus burgeri) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Sea Lamprey (Petromyzon marinus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Sea Squirt (Ciona intestinalis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Florida lancelet (Branchiostoma floridae) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
European lancelet (Branchiostoma lanceolatum) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Saccoglossus (Saccoglossus kowalevskii) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Ptychodera (Ptychodera flava) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Purple sea urchin (Strongylocentrotus purpuratus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Bat starfish (Patiria miniata) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Fruit fly (Drosophila melanogaster) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Fruit fly (Drosophila simulans) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Fruit fly (Drosophila yakuba) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Fruit fly (Drosophila ananassae) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Fruit fly (Drosophila mojavensis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Tsetse fly (Glossina pallidipes) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Yellow fever mosquito (Aedes aegypti) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
African malaria mosquito (Anopheles gambiae) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Longwing butterfly (Heliconius melpomene) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Red flour beetle (Tribolium castaneum) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Braconid wasp (Diachasmimorpha longicaudata) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Cockroach (Blattella germanica) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Common water flea (Daphnia pulex) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Large common water flea (Daphnia magna) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Deer tick (Ixodes scapularis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Two-spotted spider mite (Tetranychus urticae) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Arizona bark scorpion (Centruroides sculpturatus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Atlantic horseshoe crab (Limulus polyphemus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Roundworm (Caenorhabditis elegans) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Roundworm (Caenorhabditis briggsae) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Large roundworm (Ascaris suum) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Montseny horsehair worm (Gordionus sp.) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Penis worm (Priapulus caudatus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
California two-spot octopus (Octopus bimaculoides) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Common octopus (Octopus vulgaris) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Hawaiian bobtail squid (Euprymna scolopes) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Chambered Nautilus (Nautilus pompilius) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table
Owl limpet (Lottia gigantea) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Red Abalone (Haliotis rufescens) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Pacific oyster (Magallana gigas) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Japanese carpet shell (Ruditapes philippinarum) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Vernerds tusk shell (Pictodentalium vernedei) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Laevipilina (Monoplacophora) (Laevipilina hyalina) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
West Indian fuzzy chiton (Acanthopleura granulata ) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Mossy chiton (Mopalia muscosa) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Epimenia (Solenogaster) (Epimenia babai) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Wirenia (Solenogaster) (Wirenia argentea) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Polychaete worm (Capitella teleta) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Common brandling worm (Eisenia fetida) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Tubeworm (Owenia fusiformis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Dumerils clam worm (Platynereis dumerilii) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Peanut worm (Sipunculus nudus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table
Lingula (Lingula anatina) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Horseshoe worm (Phoronis australis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Bootlace worm (Lineus longissimus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Tiger flatworm (Prostheceraeus crozieri ) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Freshwater planarian (Schmidtea mediterranea) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Russian doll killer (Gyrodactylus salaris) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Blood fluke (Schistosoma mansoni) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Hydatid worm (Echinococcus granulosus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Monogonont Rotifer 1 (Brachionus plicatilis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Monogonont Rotifer 2 (Brachionus koreanus) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Bdelloid rotifer (Adineta vaga) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Seison (Seison nebaliae) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Thorny-headed worm 1 (Neoechinorhynchus agilis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Thorny-headed worm 2 (Pomphorhynchus laevis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Xenoturbella (Xenoturbella bocki) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Panther worm (Hofstenia miamia) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Roscoff worm (Symsagittifera roscoffensis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Starlet sea anemone (Nematostella vectensis) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Deep-sea anemone (Actinernus sp.) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Stony coral (Acropora digitifera) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Freshwater-polyp (Hydra vulgaris) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Amphimedon (Amphimedon queenslandica) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip
Muellers freshwater sponge (Ephydatia muelleri) Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download fasta Download GFF Download BED Download table Download zip