MirGeneDB 3.0
MirGeneDB ID

Xbo-Mir-92-o89

Family name MIR-92 (all species)
Species Xenoturbella (Xenoturbella bocki)
MiRBase ID xbo-mir-92b
Paralogues Xbo-Mir-92-o86  Xbo-Mir-92-o87  Xbo-Mir-92-o88  Xbo-Mir-92-o90  Xbo-Mir-92-o91 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) X. bocki
Node of Origin (family) Bilateria
Genome context
(genome.xe)		 scaffold1212: 25094-25154 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-o89)		 Mir-92-o86 scaffold1212: 17028-17087 [+] UCSC Ensembl
Mir-92-o87 scaffold1212: 23646-23707 [+] UCSC Ensembl
Mir-92-o88 scaffold1212: 24644-24704 [+] UCSC Ensembl
Mir-92-o89 scaffold1212: 25094-25154 [+] UCSC Ensembl
Mir-92-o90 scaffold1212: 25425-25485 [+] UCSC Ensembl
Mir-92-o91 scaffold1212: 25619-25678 [+] UCSC Ensembl
Seed ACUGCAC
Precursor
(pre-Mir +30nt flank)		 
UUGUCAACUAAACCAGUGUGCGCCUCCUGUCAGUCGAGACUUGUGCAUUGGUCGAGAAUAAGUGCUACUACUGCACUCGUCCCGGCCUAGCAGGUGACGUCACCCACCUCCACACGACCAC
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Structure
        10         20         30         40        50         
UUGUCAACUAAACCAGU-   -  CCU     CA-|   A   UU     U    CGAGAA 
                  GUG CG   CCUGU   GUCG GAC  GUGCA UGGU      U
                  CAC GC   GGACG   CGGC CUG  CACGU AUCA      A
CACCAGCACACCUCCACC   U  AGU     AUC^   C   CU     C    UCGUGA 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
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Star sequence

Xbo-Mir-92-o89_5p*
mirBase accessionNone
Sequence 
0- CAGUCGAGACUUGUGCAUUGGU -22
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Mature sequence

Xbo-Mir-92-o89_3p
mirBase accessionMIMAT0020125
Sequence 
38- UACUGCACUCGUCCCGGCCUAGC -61
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