MirGeneDB 3.0
MirGeneDB ID

Xbo-Mir-92-o90

Family name MIR-92 (all species)
Species Xenoturbella (Xenoturbella bocki)
MiRBase ID
Paralogues Xbo-Mir-92-o86  Xbo-Mir-92-o87  Xbo-Mir-92-o88  Xbo-Mir-92-o89  Xbo-Mir-92-o91 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) X. bocki
Node of Origin (family) Bilateria
Genome context
(genome.xe)		 scaffold1212: 25425-25485 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-o90)		 Mir-92-o86 scaffold1212: 17028-17087 [+] UCSC Ensembl
Mir-92-o87 scaffold1212: 23646-23707 [+] UCSC Ensembl
Mir-92-o88 scaffold1212: 24644-24704 [+] UCSC Ensembl
Mir-92-o89 scaffold1212: 25094-25154 [+] UCSC Ensembl
Mir-92-o90 scaffold1212: 25425-25485 [+] UCSC Ensembl
Mir-92-o91 scaffold1212: 25619-25678 [+] UCSC Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
CUUACUGCUUGCUUAUUGGAUUUCACCGAAACAGUCGAGUCAGUGGAAUGUUGUAUGAUAAAGGCAAUAUUGCACUUGUCCCGGCCUGGUUCGGUGGAGUCUGCUUGCUACUGCUAACCAA
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Structure
        10          20        30         40         50         
CUUACUGCUUGCUUAUU--             A  -    AGU -|   G     UGUAUGA 
                   GGAUUUCACCGAA CA GUCG   C AGUG AAUGU       \
                   UCUGAGGUGGCUU GU CGGC   G UCAC UUAUA       U
AACCAAUCGUCAUCGUUCG             G  C    CCU U^   G     ACGGAAA 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
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Star sequence

Xbo-Mir-92-o90_5p*
mirBase accessionNone
Sequence 
0- ACAGUCGAGUCAGUGGAAUGU -21
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Mature sequence

Xbo-Mir-92-o90_3p
mirBase accessionNone
Sequence 
37- UAUUGCACUUGUCCCGGCCUGGUU -61
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