MirGeneDB 2.1
MirGeneDB ID

Bfl-Mir-92-o7

Family name MIR-92 (all species)
Seed AAGGCAA
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID bfl-mir-2059
Paralogues Bfl-Mir-92-o1  Bfl-Mir-92-o2  Bfl-Mir-92-o3  Bfl-Mir-92-o4  Bfl-Mir-92-o5  Bfl-Mir-92-o6  Bfl-Mir-92-o8 
Orthologues Asu-Mir-92  Bla-Mir-92-o7  Cel-Mir-92  Dan-Mir-92-P7  Dme-Mir-92-P7  Dsi-Mir-92-P7  Dya-Mir-92-P7  Esc-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Bilateria
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)		 NC_049994.1: 4472650-4472707 [+] UCSC
Precursor
(pre-Mir +30nt flank)
GAUGUGUGAACAUUUGUGUUGGACCCCUUUCAAGGCAAAUUGCUGCAAUACUUUGUAUCCUGCAAGUAUUGCACUUUUUUGCUUUGAAAGGUGUUCUGACAUUUUCAGCGCUCCUGUA
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Structure
        10         20         30        40        50        
GAUGUGUGAACAUUUGU-  UG -| C              UUGC         UUGUA 
                  GU  G AC CCUUUCAAGGCAAA    UGCAAUACU     U
                  CA  C UG GGAAAGUUUCGUUU    ACGUUAUGA     C
AUGUCCUCGCGACUUUUA  GU U^ U              UUUC         ACGUC 
      110       100        90        80        70        60
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending new data.
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Bfl-Mir-92-o7_5p
mirBase accessionMIMAT0019168
Sequence 
0- CAAGGCAAAUUGCUGCAAUACU -22
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Star sequence

Bfl-Mir-92-o7_3p* (predicted)
mirBase accessionMIMAT0009985
Sequence 
36- UAUUGCACUUUUUUGCUUUGAA -58
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