Mir-92-P7

MirGeneDB ID

Dya-Mir-92-P7

Family name

MIR-92 (all species)

Species

Fruit fly (Drosophila yakuba)

MiRBase ID

dya-mir-312

Paralogues

Dya-Mir-92-P3 Dya-Mir-92-P4 Dya-Mir-92-P5 Dya-Mir-92-P6a Dya-Mir-92-P6b

Orthologues

Asu-Mir-92 Bfl-Mir-92-o7 Bla-Mir-92-o7 Cel-Mir-92 Dan-Mir-92-P7 Dme-Mir-92-P7 Dsi-Mir-92-P7 Esc-Mir-92 Gsp-Mir-92 Hmi-Mir-92 Isc-Mir-92 Obi-Mir-92 Sme-Mir-92

Node of Origin (locus)

Drosophila

Node of Origin (family)

Bilateria

Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)

2R: 12724704-12724764 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-92-P7)

Mir-7 2R: 12702754-12702815 [-] UCSC Ensembl
Mir-992 2R: 12723689-12723744 [+] UCSC Ensembl
Mir-991 2R: 12723801-12723862 [+] UCSC Ensembl
Mir-9681 2R: 12724136-12724190 [+] UCSC Ensembl
Mir-92-P6a 2R: 12724560-12724622 [+] UCSC Ensembl
Mir-92-P7 2R: 12724704-12724764 [+] UCSC Ensembl
Mir-92-P6b 2R: 12724839-12724897 [+] UCSC Ensembl
Mir-92-P5 2R: 12724949-12725008 [+] UCSC Ensembl

Seed

AUUGCAC

Precursor
(pre-Mir +30nt flank)

AUAAAGUUACAAAUUGCGUUUGAAGCGCUUCGGUUCGUCCCAGGAGCAAUUCUGCACUAUUAAAGCUAGUAUUGCACUUGAGACGGCCGGAUUACUUUUAAACGAAUCAUUUAAACAACGC

Get precursor sequence

Structure

        10         20         30        40        50        60
AUAAAGUUACAAAUUGC-        CGC-|     U    C    A     U  GCACUA 
                  GUUUGAAG    UUCGGU CGUC CAGG GCAAU CU      U
                  CAAAUUUU    AGGCCG GCAG GUUC CGUUA GA      U
CGCAACAAAUUUACUAAG        CAUU^     -    A    A     U  UCGAAA 
 .       110       100        90         80        70