Mir-92-P6a

MirGeneDB ID

Dya-Mir-92-P6a

Family name

MIR-92 (all species)

Species

Fruit fly (Drosophila yakuba)

MiRBase ID

dya-mir-311b

Paralogues

Dya-Mir-92-P3 Dya-Mir-92-P4 Dya-Mir-92-P5 Dya-Mir-92-P6b Dya-Mir-92-P7

Orthologues

Asu-Mir-92 Bfl-Mir-92-o6 Bla-Mir-92-o6 Cel-Mir-92 Dan-Mir-92-P6 Dme-Mir-92-P6 Dmo-Mir-92-P6 Dsi-Mir-92-P6 Esc-Mir-92 Gsp-Mir-92 Hmi-Mir-92 Isc-Mir-92 Obi-Mir-92 Sme-Mir-92

Node of Origin (locus)

D. yakuba

Node of Origin (family)

Bilateria

Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)

2R: 12724560-12724622 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-92-P6a)

Mir-7 2R: 12702754-12702815 [-] UCSC Ensembl
Mir-992 2R: 12723689-12723744 [+] UCSC Ensembl
Mir-991 2R: 12723801-12723862 [+] UCSC Ensembl
Mir-9681 2R: 12724136-12724190 [+] UCSC Ensembl
Mir-92-P6a 2R: 12724560-12724622 [+] UCSC Ensembl
Mir-92-P7 2R: 12724704-12724764 [+] UCSC Ensembl
Mir-92-P6b 2R: 12724839-12724897 [+] UCSC Ensembl
Mir-92-P5 2R: 12724949-12725008 [+] UCSC Ensembl

Seed

AUUGCAC

Precursor
(pre-Mir +30nt flank)

UUAGCUAAAAUCUACGUAGCCAACAAUUUUCGGCUGUGGAUUGGGCUAGUACUGUGAUUUUAGCAUUAAGUAUUGCACAUUCCCCAGCCUGAAAGUGUUAGUAACUGCCAACUAAUAACAAUU

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Structure

        10           20        30         40        50        60 
UUAGCUAAAAUCUACGUA---| C    A     -     U   U  G  U      GUGAUUU 
                     GC AACA UUUUC GGCUG GGA UG GC AGUACU       \
                     UG UUGU GAAAG CCGAC CCU AC CG UUAUGA       U
UUAACAAUAAUCAACCGUCAA^ A    -     U     C   U  A  -      AUUACGA 
 120       110       100         90        80         70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

He	Wh

Star sequence

Dya-Mir-92-P6a_5p*

mirBase accession

MIMAT0037352

Sequence

0- CGGCUGUGGAUUGGGCUAGUACU -23

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Mature sequence

Dya-Mir-92-P6a_3p

mirBase accession

MIMAT0009116

Sequence

40- UAUUGCACAUUCCCCAGCCUGAA -63

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