Mir-92-P6

MirGeneDB ID

Dsi-Mir-92-P6

Family name

MIR-92 (all species)

Seed

AUUGCAC

Species

Fruit fly (Drosophila simulans)

MiRBase ID

dsi-mir-311

Paralogues

Dsi-Mir-92-P3 Dsi-Mir-92-P4 Dsi-Mir-92-P5 Dsi-Mir-92-P7 Dsi-Mir-92-P8

Orthologues

Asu-Mir-92 Bfl-Mir-92-o6 Bla-Mir-92-o6 Cel-Mir-92 Dan-Mir-92-P6 Dme-Mir-92-P6 Dmo-Mir-92-P6 Dya-Mir-92-P6a Dya-Mir-92-P6b Esc-Mir-92 Isc-Mir-92 Obi-Mir-92 Sme-Mir-92

Node of Origin (locus)

Drosophila

Node of Origin (family)

Bilateria

Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)

2R: 16995943-16996003 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-92-P6)

Mir-92-P5 2R: 16995821-16995880 [-] UCSC Ensembl
Mir-92-P6 2R: 16995943-16996003 [-] UCSC Ensembl
Mir-92-P7 2R: 16996101-16996160 [-] UCSC Ensembl
Mir-92-P8 2R: 16996240-16996300 [-] UCSC Ensembl
Mir-991 2R: 16997663-16997724 [-] UCSC Ensembl
Mir-992 2R: 16997777-16997837 [-] UCSC Ensembl
Mir-7 2R: 17018215-17018276 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GUGAAAAAUCGAAAUUUCUAGAUCAUUUUUCGGACGGUAUAUGAGUCAAUAUUUUUUUUUUUUCGAAUAUAUUGCACAUUCACCGGCCUGAAAAUAUCAAGAAUUAGCAUCGAAAAAGAAA

Get precursor sequence

Structure

        10           20        30        40        50        60
GUGAAAAAUCGAAAUUU---| A   C      C  A    AU   A U      UUUUUUU 
                    CU GAU AUUUUU GG CGGU  AUG G CAAUAU       U
                    GA CUA UAAAAG CC GCCA  UAC C GUUAUA       U
AAAGAAAAAGCUACGAUUAA^ A   -      U  G    CU   A -      UAAGCUU 
 .       110       100         90        80         70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

He	Wh

Star sequence

Dsi-Mir-92-P6_5p*

mirBase accession

MIMAT0037347

Sequence

0- CGGACGGUAUAUGAGUCAAUAUU -23

Get sequence

Mature sequence

Dsi-Mir-92-P6_3p

mirBase accession

MIMAT0008857

Sequence

39- UAUUGCACAUUCACCGGCCUGA -61

Get sequence