Mir-92-P8

MirGeneDB ID

Dsi-Mir-92-P8

Family name

MIR-92 (all species)

Species

Fruit fly (Drosophila simulans)

MiRBase ID

dsi-mir-313

Paralogues

Dsi-Mir-92-P3 Dsi-Mir-92-P4 Dsi-Mir-92-P5 Dsi-Mir-92-P6 Dsi-Mir-92-P7

Orthologues

Asu-Mir-92 Bfl-Mir-92-o8 Bla-Mir-92-o8 Cel-Mir-92 Dan-Mir-92-P8 Dme-Mir-92-P8 Dmo-Mir-92-P8 Esc-Mir-92 Gsp-Mir-92 Hmi-Mir-92 Isc-Mir-92 Obi-Mir-92 Sme-Mir-92

Node of Origin (locus)

Drosophila

Node of Origin (family)

Bilateria

Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)

2R: 16996240-16996300 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-92-P8)

Mir-92-P5 2R: 16995821-16995880 [-] UCSC Ensembl
Mir-92-P6 2R: 16995943-16996003 [-] UCSC Ensembl
Mir-92-P7 2R: 16996101-16996160 [-] UCSC Ensembl
Mir-92-P8 2R: 16996240-16996300 [-] UCSC Ensembl
Mir-991 2R: 16997663-16997724 [-] UCSC Ensembl
Mir-992 2R: 16997777-16997837 [-] UCSC Ensembl
Mir-7 2R: 17018215-17018276 [+] UCSC Ensembl

Seed

AUUGCAC

Precursor
(pre-Mir +30nt flank)

UGCCGGACAUCGAUCUAGCCAACAAUUUUCUGCUGCGCAUUGGGGCACUACUGUUUUUUUUAAAUUGAGUAUUGCACUUUUCACAGCCUUAAAAUGUUAGCAACUGCCUAAUACUAACAAU

Get precursor sequence

Structure

        10           20        30        40         50          
UGCCGGACAUCGAUCUA---| C    A   UCU    CGCAUU   -   C    GUUUUUU 
                    GC AACA UUU   GCUG      GGG GCA UACU       \
                    CG UUGU AAA   CGAC      UUC CGU AUGA       U
UAACAAUCAUAAUCCGUCAA^ A    A   UUC    ACUU--   A   U    GUUAAAU 
 .       110       100        90        80          70