MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-92-o8

Family name MIR-92 (all species)
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-92-o1  Bla-Mir-92-o2  Bla-Mir-92-o3  Bla-Mir-92-o4  Bla-Mir-92-o5  Bla-Mir-92-o6  Bla-Mir-92-o7 
Orthologues Asu-Mir-92  Bfl-Mir-92-o8  Cel-Mir-92  Dan-Mir-92-P8  Dme-Mir-92-P8  Dmo-Mir-92-P8  Dsi-Mir-92-P8  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Bilateria
Genome context
(BraLan2)		 Sc0000209: 482117-482182 [-] Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
UCCGACGUACUGAAGUUGAGGCUCACUUUCAAAAAGCAAAAAGUUGCAAUAUCGUUAUGCGACGUUACGUUAGAUAUUGCACUAAUUUGCUUUUGAAAGUGGUACCUUCCACUCAUCGAUAGCUUU
Get precursor sequence
Structure
        10         20         30        40         50        60   
UCCGACGUACUGAAGUU-    C-|           A     A-   U        GUUAUGCGA 
                  GAGG  UCACUUUCAAAA GCAAA  AGU GCAAUAUC         \
                  UUCC  GGUGAAAGUUUU CGUUU  UCA CGUUAUAG         C
UUUCGAUAGCUACUCACC    AU^           -     AA   -        AUUGCAUUG 
    120       110       100         90         80        70
Deep sequencing
Go to detailed chart
CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending new data.
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ad Ad Em Em Em Em
Star sequence

Bla-Mir-92-o8_5p* (predicted)
mirBase accessionNone
Sequence 
0- AAAAAGCAAAAAGUUGCAAUAUC -23
Get sequence
Mature sequence

Bla-Mir-92-o8_3p (predicted)
mirBase accessionNone
Sequence 
44- UAUUGCACUAAUUUGCUUUUGA -66
Get sequence