MirGeneDB 3.0
MirGeneDB ID

Dpu-Mir-92-P4

Family name MIR-92 (all species)
Species Common water flea (Daphnia pulex)
MiRBase ID dpu-mir-92
Paralogues Dpu-Mir-92-P3 
Orthologues Aae-Mir-92-P4  Aga-Mir-92-P4  Asu-Mir-92  Bfl-Mir-92-o4  Bge-Mir-92-P4  Bla-Mir-92-o4  Cel-Mir-92  Dan-Mir-92-P4  Dlo-Mir-92-P4  Dma-Mir-92-P4  Dme-Mir-92-P4  Dmo-Mir-92-P4  Dsi-Mir-92-P4  Dya-Mir-92-P4  Esc-Mir-92  Gpa-Mir-92-P4  Gsp-Mir-92  Hme-Mir-92-P4  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Tca-Mir-92-P4 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Daphnia_pulex.V1.0)		 DAPPUscaffold_38: 876332-876391 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P4)		 Mir-92-P3 DAPPUscaffold_38: 876143-876215 [+] Ensembl
Mir-92-P4 DAPPUscaffold_38: 876332-876391 [+] Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
ACCAAUUCACCUUGAUAGUCAACCUUAUGAAGGCUUUGACUUGGGCAACUUCGUUUAAAUGUUUGUCGAAUUGCACUCGUCCCGGCCUGCUUAACUGGACUAAAAAAACUUCAUAUGAUA
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Structure
        10           20        30        40        50          
ACCAAUUCACCUUGAUA---|  AACC   UGA     UU   UUGG    C    UUUAAA 
                    GUC    UUA   AGGCU  GAC    GCAA UUCG      \
                    CAG    AAU   UCCGG  CUG    CGUU AAGC      U
AUAGUAUACUUCAAAAAAAU^  GUC-   UCG     CC   CUCA    -    UGUUUG 
.       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Star sequence

Dpu-Mir-92-P4_5p*
mirBase accessionNone
Sequence 
0- AGGCUUUGACUUGGGCAACUUCG -23
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Mature sequence

Dpu-Mir-92-P4_3p
mirBase accessionMIMAT0012672
Sequence 
38- AAUUGCACUCGUCCCGGCCUGC -60
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