MirGeneDB 3.0

MirGeneDB ID

Dlo-Mir-92-P4

Family name MIR-92 (all species)
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues Dlo-Mir-92-P3  Dlo-Mir-92-P14 
Orthologues Aae-Mir-92-P4  Aga-Mir-92-P4  Asu-Mir-92  Bfl-Mir-92-o4  Bge-Mir-92-P4  Bla-Mir-92-o4  Cel-Mir-92  Dan-Mir-92-P4  Dma-Mir-92-P4  Dme-Mir-92-P4  Dmo-Mir-92-P4  Dpu-Mir-92-P4  Dsi-Mir-92-P4  Dya-Mir-92-P4  Esc-Mir-92  Gpa-Mir-92-P4  Gsp-Mir-92  Hme-Mir-92-P4  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Tca-Mir-92-P4 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)
NC_087237.1: 6570966-6571029 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P4)
Mir-92-P4 NC_087237.1: 6570966-6571029 [-] Ensembl
Mir-92-P3 NC_087237.1: 6571106-6571166 [-] Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)
AGAUGUUCCACAAGAUUUUGAUUGUCGUGCAGGCGGAGAUGAGCGCACUAUUUGUGAUUUUUUUGUAUAUCAAAUUGCACUCGUCCCGGCCUGCGGGAUUAUCGAUUGAUCAGCCCCAUGAAGC
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Structure
        10          20        30         40        50        60  
AGAUGUUCCACAAGAUU--     U   G      -|  A      C   CU     UGAUUUU 
                   UUGAU GUC UGCAGG CGG GAUGAG GCA  AUUUG       U
                   AGCUA UAG GCGUCC GCC CUGCUC CGU  UAAAC       U
CGAAGUACCCCGACUAGUU     U   G      G^  -      A   --     UAUAUGU 
  120       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Sr Sr
Star sequence

Dlo-Mir-92-P4_5p* (predicted)

mirBase accessionNone
Sequence
0- AGGCGGAGAUGAGCGCACUAUUUG -24
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Mature sequence

Dlo-Mir-92-P4_3p

mirBase accessionNone
Sequence
42- AAUUGCACUCGUCCCGGCCUGC -64
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