MirGeneDB 3.0
MirGeneDB ID

Dpu-Mir-92-P3

Family name MIR-92 (all species)
Species Common water flea (Daphnia pulex)
MiRBase ID
Paralogues Dpu-Mir-92-P4 
Orthologues Aae-Mir-92-P3  Aga-Mir-92-P3  Asu-Mir-92  Bfl-Mir-92-o3  Bge-Mir-92-P3  Bla-Mir-92-o3  Cel-Mir-92  Dan-Mir-92-P3  Dlo-Mir-92-P3  Dma-Mir-92-P3  Dme-Mir-92-P3  Dmo-Mir-92-P3  Dsi-Mir-92-P3  Dya-Mir-92-P3  Esc-Mir-92  Gpa-Mir-92-P3  Gsp-Mir-92  Hme-Mir-92-P3  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Tca-Mir-92-P3 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Daphnia_pulex.V1.0)		 DAPPUscaffold_38: 876143-876215 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P3)		 Mir-92-P3 DAPPUscaffold_38: 876143-876215 [+] Ensembl
Mir-92-P4 DAPPUscaffold_38: 876332-876391 [+] Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
AAAGACUGCAUGUUAUUUGAUACGAAGGGUAGGCUUUGACUGGUGGCAAUUUUUCAUCUAUGCCUCGAAAUAUGGCAGAAAUAUUGCACUCGUCCCGGCCUGUCUUUUGUAUUCACAUUCGACGAUAUGUAAC
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Structure
        10          20        30        40        50        60      
AAAGACUGCAUGUUAUUU--|         GU     UU   U    G    UUUUCAUCUAUGCCU 
                    GAUACGAAGG  AGGCU  GAC GGUG CAAU               C
                    UUAUGUUUUC  UCCGG  CUG UCAC GUUA               G
CAAUGUAUAGCAGCUUACAC^         UG     CC   C    -    UAAAGACGGUAUAAA 
 130       120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Dpu-Mir-92-P3_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGCUUUGACUGGUGGCAAUUU -22
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Mature sequence

Dpu-Mir-92-P3_3p
mirBase accessionNone
Sequence 
51- UAUUGCACUCGUCCCGGCCUGU -73
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