MirGeneDB 2.1

MirGeneDB ID

Dmo-Mir-92-P3

Family name MIR-92 (all species)
Seed GGACGGG
Species Fruit fly (Drosophila mojavensis)
MiRBase ID dmo-mir-92a
Paralogues Dmo-Mir-92-P4  Dmo-Mir-92-P5  Dmo-Mir-92-P6  Dmo-Mir-92-P8 
Orthologues Asu-Mir-92  Bfl-Mir-92-o3  Bla-Mir-92-o3  Cel-Mir-92  Dan-Mir-92-P3  Dme-Mir-92-P3  Dsi-Mir-92-P3  Dya-Mir-92-P3  Esc-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) Drosophila
Node of Origin (family) Bilateria
Genome context
(Dmoj_caf1)
scaffold_6540: 25734579-25734639 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P3)
Mir-92-P4 scaffold_6540: 25731666-25731728 [-] Ensembl
Mir-92-P3 scaffold_6540: 25734579-25734639 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
ACUGCAAUACCCAAAUCAUAAAUUGCUUGCAGGACGGGAAGGUGUCAACGUUUUACCUUUUGAUUCAAACAUUGCACUUGUCCCGGCCUAUGAGCGGUUUAUCUUACAACAAUCAGGUCCA
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Structure
        10          20        30         40        50          
ACUGCAAUACCCAAAUC--           GC   A     -|    U   C   UUACCUU 
                   AUAAAUUGCUU  AGG CGGGA AGGUG CAA GUU       \
                   UAUUUGGCGAG  UCC GCCCU UUCAC GUU CAA       U
ACCUGGACUAACAACAUUC           UA   G     G^    -   A   ACUUAGU 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Em Fe Ma Ma
Mature sequence

Dmo-Mir-92-P3_5p

mirBase accessionNone
Sequence
0- AGGACGGGAAGGUGUCAACGUU -22
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Star sequence

Dmo-Mir-92-P3_3p*

mirBase accessionMIMAT0008633
Sequence
39- CAUUGCACUUGUCCCGGCCUAU -61
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