MirGeneDB 3.0

MirGeneDB ID

Dmo-Mir-92-P5

Family name MIR-92 (all species)
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues Dmo-Mir-92-P3  Dmo-Mir-92-P4  Dmo-Mir-92-P6  Dmo-Mir-92-P8 
Orthologues Asu-Mir-92  Bfl-Mir-92-o5  Bla-Mir-92-o5  Cel-Mir-92  Dan-Mir-92-P5  Dme-Mir-92-P5  Dsi-Mir-92-P5  Dya-Mir-92-P5  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) Drosophila
Node of Origin (family) Bilateria
Genome context
(Dmoj_caf1)
scaffold_6496: 9090312-9090376 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P5)
Mir-92-P5 scaffold_6496: 9090312-9090376 [-] Ensembl
Mir-92-P6 scaffold_6496: 9090464-9090534 [-] Ensembl
Mir-92-P8 scaffold_6496: 9090674-9090732 [-] Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)
CAUAAAUAUCGUUUAAAUGUAUCCAUUUUUAGGCCGUGCUAUGUGACAAUAUGUAUUUAAAUUGUAUUUAUCAUAUUGCACAUCUCCCGGCCUACAAGUGUAAAUGCACAAUUCAACUAUGUACA
Get precursor sequence
Structure
        10        20          30        40        50        60  
CAUAAAUAUCGUUUAAAU    C--|    U       UGCU     A       UAUUUAAA 
                  GUAU   CAUUU UAGGCCG    AUGUG CAAUAUG        U
                  CGUA   GUGAA AUCCGGC    UACAC GUUAUAC        U
ACAUGUAUCAACUUAACA    AAU^    C       CCUC     -       UAUUUAUG 
   120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Em Fe Ma Ma
Star sequence

Dmo-Mir-92-P5_5p*

mirBase accessionNone
Sequence
0- AGGCCGUGCUAUGUGACAAUAUG -23
Get sequence
Mature sequence

Dmo-Mir-92-P5_3p

mirBase accessionNone
Sequence
43- UAUUGCACAUCUCCCGGCCUAC -65
Get sequence