MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-92-P2a

Family name MIR-92 (all species)
Seed AUUGCAC
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-367
Paralogues Dno-Mir-92-P1a  Dno-Mir-92-P1c  Dno-Mir-92-P1d  Dno-Mir-92-P2c  Dno-Mir-92-P2d 
Orthologues Aca-Mir-92-P2a  Ami-Mir-92-P2a  Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Bta-Mir-92-P2a  Cel-Mir-92  Cfa-Mir-92-P2a  Cli-Mir-92-P2a  Cmi-Mir-92-P2a  Cpi-Mir-92-P2a  Cpo-Mir-92-P2a  Esc-Mir-92  Ete-Mir-92-P2a  Gga-Mir-92-P2a  Gja-Mir-92-P2a  Hsa-Mir-92-P2a  Isc-Mir-92  Mdo-Mir-92-P2a  Mml-Mir-92-P2a  Mmu-Mir-92-P2a  Mun-Mir-92-P2a  Oan-Mir-92-P2a  Obi-Mir-92  Ocu-Mir-92-P2a  Rno-Mir-92-P2a  Sha-Mir-92-P2a  Sme-Mir-92  Spt-Mir-92-P2a  Sto-Mir-92-P2a  Tgu-Mir-92-P2a  Xla-Mir-92-P2a  Xtr-Mir-92-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(dasNov3)
JH580080: 1519066-1519125 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P2a)
Mir-92-P2a JH580080: 1519066-1519125 [-] UCSC Ensembl
Mir-430-P4 JH580080: 1519185-1519244 [-] UCSC Ensembl
Mir-430-P3 JH580080: 1519344-1519404 [-] UCSC Ensembl
Mir-430-P2 JH580080: 1519526-1519585 [-] UCSC Ensembl
Mir-430-P1 JH580080: 1519661-1519717 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUCUAUAUUGCUGGGAGUUACAGGCCACUACUGUUGCUAAUAUGCAACUCUGUUCAAUAUAAAGUGGAAUUGCACUUUAGCAAUGGUGAUGGAGUGUGUCAAUUGCCGGCAGUGAAAUU
Get precursor sequence
Structure
        10          20        30        40        50         
UAUCUAUAUUGCUGGGAGU--|   GG   C            UA     C   GUUCAA 
                     UACA  CCA UACUGUUGCUAA  UGCAA UCU      U
                     GUGU  GGU GUGGUAACGAUU  ACGUU AGG      A
UUAAAGUGACGGCCGUUAACU^   GA   A            UC     A   UGAAAU 
.       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Dno-Mir-92-P2a_5p* (predicted)

mirBase accessionMIMAT0047838
Sequence
0- ACUGUUGCUAAUAUGCAACUCU -22
Get sequence
Mature sequence

Dno-Mir-92-P2a_3p (predicted)

mirBase accessionMIMAT0047839
Sequence
38- AAUUGCACUUUAGCAAUGGUGA -60
Get sequence