Mir-92-P2a

MirGeneDB ID

Mmu-Mir-92-P2a

Family name

MIR-92 (all species)

Species

House mouse (Mus musculus)

MiRBase ID

mmu-mir-367

Paralogues

Mmu-Mir-92-P1a Mmu-Mir-92-P1c Mmu-Mir-92-P1d Mmu-Mir-92-P2c Mmu-Mir-92-P2d

Orthologues

Aca-Mir-92-P2a Ami-Mir-92-P2a Asu-Mir-92 Bfl-Mir-92-o2 Bla-Mir-92-o2 Bta-Mir-92-P2a Cel-Mir-92 Cfa-Mir-92-P2a Cja-Mir-92-P2a Cli-Mir-92-P2a Cmi-Mir-92-P2a Cpi-Mir-92-P2a Cpo-Mir-92-P2a Dno-Mir-92-P2a Eca-Mir-92-P2a Esc-Mir-92 Ete-Mir-92-P2a Gga-Mir-92-P2a Gja-Mir-92-P2a Gsp-Mir-92 Hmi-Mir-92 Hsa-Mir-92-P2a Isc-Mir-92 Laf-Mir-92-P2a Mdo-Mir-92-P2a Mml-Mir-92-P2a Mmr-Mir-92-P2a Mun-Mir-92-P2a Neu-Mir-92-P2a Oan-Mir-92-P2a Obi-Mir-92 Ocu-Mir-92-P2a Pab-Mir-92-P2a Rno-Mir-92-P2a Sha-Mir-92-P2a Sme-Mir-92 Spt-Mir-92-P2a Sto-Mir-92-P2a Tgu-Mir-92-P2a Xla-Mir-92-P2a Xtr-Mir-92-P2a

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(mm10)

chr3: 127545741-127545800 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-92-P2a)

Mir-430-P1 chr3: 127545238-127545297 [+] UCSC Ensembl
Mir-430-P2 chr3: 127545368-127545427 [+] UCSC Ensembl
Mir-430-P3 chr3: 127545501-127545561 [+] UCSC Ensembl
Mir-430-P4 chr3: 127545629-127545687 [+] UCSC Ensembl
Mir-92-P2a chr3: 127545741-127545800 [+] UCSC Ensembl

Seed

AUUGCAC

Precursor
(pre-Mir +30nt flank)

UGUGCUGCAUAUAGAUAGACCAAGGCCGUCACUGUUGCUAACAUGCAACUCUGUUGAAUAGAAAUUGGAAUUGCACUUUAGCAAUGGUGAUGGACCUGUGUCAGUGGCCACUUACUUGGA

Get precursor sequence

Structure

        10         20         30        40        50         
UGUGCUGCAUAUAGAUA-   CA   -|               CA     C   GUUGAA 
                  GAC  AGG CCGUCACUGUUGCUAA  UGCAA UCU      U
                  CUG  UCC GGUAGUGGUAACGAUU  ACGUU AGG      A
AGGUUCAUUCACCGGUGA   UG   A^               UC     A   UUAAAG 
.       110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Br	Br	Ce	Ce	Em	Em	He	Ki	Li	Lu	Ov	Pa	Sk	Sp	Te

Star sequence

Mmu-Mir-92-P2a_5p*

mirBase accession

MIMAT0017214

Sequence

0- ACUGUUGCUAACAUGCAACUCU -22

Get sequence

Proposed targets

TargetScanVert: mmu-miR-367-5p
miRDB: MIMAT0017214

Mature sequence

Mmu-Mir-92-P2a_3p

mirBase accession

MIMAT0003181

Sequence

38- AAUUGCACUUUAGCAAUGGUGA -60

Get sequence

Proposed targets

microrna.org: MIMAT0003181
TargetScanVert: mmu-miR-367-3p
miRDB: MIMAT0003181