MirGeneDB ID | Mmu-Mir-430-P3 |
Family name |
MIR-430 (all species) |
Species |
House mouse (Mus musculus) |
MiRBase ID |
mmu-mir-302a
|
Paralogues |
Mmu-Mir-430-P1
Mmu-Mir-430-P2
Mmu-Mir-430-P4
Mmu-Mir-430-P5a
Mmu-Mir-430-P5b
Mmu-Mir-430-P5c
Mmu-Mir-430-P6
Mmu-Mir-430-P7a
Mmu-Mir-430-P7b
Mmu-Mir-430-P7c
|
Orthologues |
Aca-Mir-430-P3
Ami-Mir-430-P3
Bta-Mir-430-P3
Cfa-Mir-430-P3
Cja-Mir-430-P3
Cli-Mir-430-P3
Cmi-Mir-430-P3
Cpi-Mir-430-P3
Cpo-Mir-430-P3
Dno-Mir-430-P3
Dre-Mir-430-o3a1
Dre-Mir-430-o3a2
Dre-Mir-430-o3a3
Dre-Mir-430-o3a4
Dre-Mir-430-o3a5
Dre-Mir-430-o3a6
Dre-Mir-430-o3a7
Dre-Mir-430-o3a8
Dre-Mir-430-o3a9
Dre-Mir-430-o3a10
Dre-Mir-430-o3a11
Dre-Mir-430-o3a12
Dre-Mir-430-o3a13
Dre-Mir-430-o3a14
Dre-Mir-430-o3a15
Dre-Mir-430-o3a16
Dre-Mir-430-o3b1
Dre-Mir-430-o3b2
Eca-Mir-430-P3
Ete-Mir-430-P3
Gga-Mir-430-P3
Gja-Mir-430-P3
Hsa-Mir-430-P3
Laf-Mir-430-P3
Mdo-Mir-430-P3
Mml-Mir-430-P3
Mmr-Mir-430-P3
Neu-Mir-430-P3
Oan-Mir-430-P3
Ocu-Mir-430-P3
Pab-Mir-430-P3
Rno-Mir-430-P3
Sha-Mir-430-P3
Spt-Mir-430-P3
Sto-Mir-430-P3
Tgu-Mir-430-P3
Xla-Mir-430-P3a
Xla-Mir-430-P3b
Xtr-Mir-430-P3
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Vertebrata
|
Genome context (mm10) |
chr3: 127545501-127545561 [+]
UCSC
Ensembl
|
Clustered miRNAs (< 50kb from Mir-430-P3) |
Mir-430-P1
chr3: 127545238-127545297 [+]
UCSC
Ensembl
Mir-430-P2
chr3: 127545368-127545427 [+]
UCSC
Ensembl
Mir-430-P3
chr3: 127545501-127545561 [+]
UCSC
Ensembl
Mir-430-P4
chr3: 127545629-127545687 [+]
UCSC
Ensembl
Mir-92-P2a
chr3: 127545741-127545800 [+]
UCSC
Ensembl
|
Seed |
AAGUGCU |
Precursor (pre-Mir +30nt flank) |
UUAAGGGAGUUAUUGACUGGGCUUCCCACCACUUAAACGUGGUUGUACUUGCUUUAGACCUAAGAAAGUAAGUGCUUCCAUGUUUUGGUGAUGGUAUGUUUUCCUUUAUAUUCAUGCCUUU
Get precursor sequence
|
Structure | 10 20 30 40 50
UUAAGGGAGUUAUUGACU--| UUC C U UU UUAGAC
GGGC CCA CACU AAACGUGG GUACUUGCU \
UUUG GGU GUGG UUUGUACC CGUGAAUGA C
UUUCCGUACUUAUAUUUCCU^ UAU A U UU AAGAAU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Br |
Br |
Ce |
Ce |
Em |
Em |
He |
Ki |
Li |
Lu |
Ov |
Pa |
Sk |
Sp |
Te |
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Star sequence |
Mmu-Mir-430-P3_5p* |
mirBase accession | MIMAT0004579 |
Sequence |
0- ACUUAAACGUGGUUGUACUUGCU -23
Get sequence
|
Proposed targets |
microrna.org: MIMAT0004579
TargetScanVert: mmu-miR-302a-5p
miRDB: MIMAT0004579
|
Mature sequence |
Mmu-Mir-430-P3_3p |
mirBase accession | MIMAT0000380 |
Sequence |
38- UAAGUGCUUCCAUGUUUUGGUGA -61
Get sequence
|
Proposed targets |
microrna.org: MIMAT0000380
TargetScanVert: mmu-miR-302a-3p
miRDB: MIMAT0000380
|