Mir-430-P3

MirGeneDB ID

Hsa-Mir-430-P3

Family name

MIR-430 (all species)

Seed

AAGUGCU

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-302a

Paralogues

Hsa-Mir-430-P1 Hsa-Mir-430-P2 Hsa-Mir-430-P4 Hsa-Mir-430-P5 Hsa-Mir-430-P6 Hsa-Mir-430-P7 Hsa-Mir-430-P8a Hsa-Mir-430-P8b Hsa-Mir-430-P9a Hsa-Mir-430-P9b Hsa-Mir-430-P10 Hsa-Mir-430-P11 Hsa-Mir-430-P12 Hsa-Mir-430-P13 Hsa-Mir-430-P14 Hsa-Mir-430-P15 Hsa-Mir-430-P16 Hsa-Mir-430-P17 Hsa-Mir-430-P18 Hsa-Mir-430-P19 Hsa-Mir-430-P20 Hsa-Mir-430-P21 Hsa-Mir-430-P22 Hsa-Mir-430-P23 Hsa-Mir-430-P24 Hsa-Mir-430-P25 Hsa-Mir-430-P26 Hsa-Mir-430-P27a Hsa-Mir-430-P27b Hsa-Mir-430-P29a Hsa-Mir-430-P29b Hsa-Mir-430-P31a Hsa-Mir-430-P31b Hsa-Mir-430-P33 Hsa-Mir-430-P34 Hsa-Mir-430-P35a Hsa-Mir-430-P35b Hsa-Mir-430-P35c Hsa-Mir-430-P38 Hsa-Mir-430-P39 Hsa-Mir-430-P41 Hsa-Mir-430-P42 Hsa-Mir-430-P43 Hsa-Mir-430-P44 Hsa-Mir-430-P45 Hsa-Mir-430-P46 Hsa-Mir-430-P47 Hsa-Mir-430-P48 Hsa-Mir-430-P49 Hsa-Mir-430-P50

Orthologues

Aca-Mir-430-P3 Ami-Mir-430-P3 Bta-Mir-430-P3 Cfa-Mir-430-P3 Cli-Mir-430-P3 Cmi-Mir-430-P3 Cpi-Mir-430-P3 Cpo-Mir-430-P3 Dno-Mir-430-P3 Dre-Mir-430-o3a1 Dre-Mir-430-o3a2 Dre-Mir-430-o3a3 Dre-Mir-430-o3a4 Dre-Mir-430-o3a5 Dre-Mir-430-o3a6 Dre-Mir-430-o3a7 Dre-Mir-430-o3a8 Dre-Mir-430-o3a9 Dre-Mir-430-o3a10 Dre-Mir-430-o3a11 Dre-Mir-430-o3a12 Dre-Mir-430-o3a13 Dre-Mir-430-o3a14 Dre-Mir-430-o3a15 Dre-Mir-430-o3a16 Dre-Mir-430-o3b1 Dre-Mir-430-o3b2 Ete-Mir-430-P3 Gga-Mir-430-P3 Gja-Mir-430-P3 Mdo-Mir-430-P3 Mml-Mir-430-P3 Mmu-Mir-430-P3 Oan-Mir-430-P3 Ocu-Mir-430-P3 Rno-Mir-430-P3 Sha-Mir-430-P3 Spt-Mir-430-P3 Sto-Mir-430-P3 Tgu-Mir-430-P3 Xla-Mir-430-P3a Xla-Mir-430-P3b Xtr-Mir-430-P3

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr4: 112648186-112648246 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P3)

Mir-92-P2a chr4: 112647877-112647936 [-] UCSC Ensembl
Mir-430-P4 chr4: 112648006-112648066 [-] UCSC Ensembl
Mir-430-P3 chr4: 112648186-112648246 [-] UCSC Ensembl
Mir-430-P2 chr4: 112648366-112648425 [-] UCSC Ensembl
Mir-430-P1 chr4: 112648489-112648547 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CUAACUUUUUCCAAGACUGGGCUCCCCACCACUUAAACGUGGAUGUACUUGCUUUGAAACUAAAGAAGUAAGUGCUUCCAUGUUUUGGUGAUGGUAAGUCUUCCUUUUACAUUUUUAUUAU

Get precursor sequence

Structure

        10          20        30        40        50          
CUAACUUUUUCCAAGACU--|    CC   C    U         U         UUGAAA 
                    GGGCU  CCA CACU AAACGUGGA GUACUUGCU      \
                    UCUGA  GGU GUGG UUUGUACCU CGUGAAUGA      C
UAUUAUUUUUACAUUUUCCU^    AU   A    U         U         AGAAAU 
 .       110       100        90        80        70

Deep sequencing

Go to detailed chart

Comment

There is a highly expressed set of reads on the 5p arm +3 relative to what is annotated here, but without an accompanying set of 3p reads.

3' NTU

Motifs

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Star sequence

Hsa-Mir-430-P3_5p*

mirBase accession

MIMAT0000683

Sequence

0- ACUUAAACGUGGAUGUACUUGCU -23

Get sequence

Proposed targets

microrna.org: MIMAT0000683
TargetScanVert: hsa-miR-302a-5p
TargetMiner: hsa-miR-302a-5p
miRDB: MIMAT0000683

Mature sequence

Hsa-Mir-430-P3_3p

mirBase accession

MIMAT0000684

Sequence

38- UAAGUGCUUCCAUGUUUUGGUGA -61

Get sequence

Proposed targets

microrna.org: MIMAT0000684
TargetScanVert: hsa-miR-302a-3p
TargetMiner: hsa-miR-302a-3p
miRDB: MIMAT0000684