Mir-430-P6

MirGeneDB ID

Hsa-Mir-430-P6

Family name

MIR-430 (all species)

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-372

Paralogues

Hsa-Mir-430-P1 Hsa-Mir-430-P2 Hsa-Mir-430-P3 Hsa-Mir-430-P4 Hsa-Mir-430-P5 Hsa-Mir-430-P7 Hsa-Mir-430-P8a Hsa-Mir-430-P8b Hsa-Mir-430-P9 Hsa-Mir-430-P10 Hsa-Mir-430-P11 Hsa-Mir-430-P12a Hsa-Mir-430-P12b Hsa-Mir-430-P13 Hsa-Mir-430-P14 Hsa-Mir-430-P15 Hsa-Mir-430-P16a Hsa-Mir-430-P16b Hsa-Mir-430-P17 Hsa-Mir-430-P18 Hsa-Mir-430-P19 Hsa-Mir-430-P20 Hsa-Mir-430-P21 Hsa-Mir-430-P22 Hsa-Mir-430-P23 Hsa-Mir-430-P24 Hsa-Mir-430-P25 Hsa-Mir-430-P26 Hsa-Mir-430-P27 Hsa-Mir-430-P28 Hsa-Mir-430-P29a Hsa-Mir-430-P29b Hsa-Mir-430-P29c Hsa-Mir-430-P30 Hsa-Mir-430-P31a Hsa-Mir-430-P31b Hsa-Mir-430-P32 Hsa-Mir-430-P33a Hsa-Mir-430-P33b Hsa-Mir-430-P34a Hsa-Mir-430-P34b Hsa-Mir-430-P35 Hsa-Mir-430-P36 Hsa-Mir-430-P37a Hsa-Mir-430-P37b Hsa-Mir-430-P37c Hsa-Mir-430-P38 Hsa-Mir-430-P39 Hsa-Mir-430-P40a Hsa-Mir-430-P40b Hsa-Mir-430-P41a Hsa-Mir-430-P41b

Orthologues

Cja-Mir-430-P6 Dno-Mir-430-P6 Eca-Mir-430-P6 Mml-Mir-430-P6 Mmr-Mir-430-P6 Mmu-Mir-430-P6 Pab-Mir-430-P6 Rno-Mir-430-P6a Rno-Mir-430-P6b Xla-Mir-430-o6a Xla-Mir-430-o6b Xtr-Mir-430-o6

Node of Origin (locus)

Eutheria

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr19: 53787895-53787953 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P6)

Mir-430-P37b chr19: 53739348-53739407 [+] UCSC Ensembl
Mir-430-P29c chr19: 53741332-53741390 [+] UCSC Ensembl
Mir-430-P33b chr19: 53742528-53742587 [+] UCSC Ensembl
Mir-430-P31b chr19: 53748650-53748710 [+] UCSC Ensembl
Mir-430-P39 chr19: 53751226-53751285 [+] UCSC Ensembl
Mir-430-P40a chr19: 53752410-53752470 [+] UCSC Ensembl
Mir-430-P37c chr19: 53754031-53754089 [+] UCSC Ensembl
Mir-430-P41b chr19: 53756756-53756818 [+] UCSC Ensembl
Mir-430-P16b chr19: 53758246-53758304 [+] UCSC Ensembl
Mir-430-P41a chr19: 53761148-53761210 [+] UCSC Ensembl
Mir-430-P40b chr19: 53762358-53762418 [+] UCSC Ensembl
Mir-430-P5 chr19: 53787680-53787738 [+] UCSC Ensembl
Mir-430-P6 chr19: 53787895-53787953 [+] UCSC Ensembl
Mir-430-P7 chr19: 53788710-53788770 [+] UCSC Ensembl

Seed

AAGUGCU

Precursor
(pre-Mir +30nt flank)

UCUUGCAGAUGGAGCUGCUCACCCUGUGGGCCUCAAAUGUGGAGCACUAUUCUGAUGUCCAAGUGGAAAGUGCUGCGACAUUUGAGCGUCACCGGUGACGCCCAUAUCAACGGAUGCCG

Get precursor sequence

Structure

        10           20        30         40         50         
UCUUGCAGAUGGAGCUGC---|    CU    G -         - G      A    GAUGU 
                     UCACC  GUGG C CUCAAAUGU G AGCACU UUCU     \
                     AGUGG  CACU G GAGUUUACA C UCGUGA AAGG     C
GCCGUAGGCAACUAUACCCGC^    C-    - C         G G      -    UGAAC 
       110       100         90         80        70         60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Star sequence

Hsa-Mir-430-P6_5p*

mirBase accession

MIMAT0026484

Sequence

0- CCUCAAAUGUGGAGCACUAUUCU -23

Get sequence

Proposed targets

TargetScanVert: hsa-miR-372-5p
miRDB: MIMAT0026484

Mature sequence

Hsa-Mir-430-P6_3p

mirBase accession

MIMAT0000724

Sequence

36- AAAGUGCUGCGACAUUUGAGCGU -59

Get sequence

Proposed targets

microrna.org: MIMAT0000724
TargetScanVert: hsa-miR-372-3p
miRDB: MIMAT0000724