MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-430-P23

Family name

MIR-430 (all species)

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-520b

Paralogues

Hsa-Mir-430-P1 Hsa-Mir-430-P2 Hsa-Mir-430-P3 Hsa-Mir-430-P4 Hsa-Mir-430-P5 Hsa-Mir-430-P6 Hsa-Mir-430-P7 Hsa-Mir-430-P8a Hsa-Mir-430-P8b Hsa-Mir-430-P9 Hsa-Mir-430-P10 Hsa-Mir-430-P11 Hsa-Mir-430-P12a Hsa-Mir-430-P12b Hsa-Mir-430-P13 Hsa-Mir-430-P14 Hsa-Mir-430-P15 Hsa-Mir-430-P16a Hsa-Mir-430-P16b Hsa-Mir-430-P17 Hsa-Mir-430-P18 Hsa-Mir-430-P19 Hsa-Mir-430-P20 Hsa-Mir-430-P21 Hsa-Mir-430-P22 Hsa-Mir-430-P24 Hsa-Mir-430-P25 Hsa-Mir-430-P26 Hsa-Mir-430-P27 Hsa-Mir-430-P28 Hsa-Mir-430-P29a Hsa-Mir-430-P29b Hsa-Mir-430-P29c Hsa-Mir-430-P30 Hsa-Mir-430-P31a Hsa-Mir-430-P31b Hsa-Mir-430-P32 Hsa-Mir-430-P33a Hsa-Mir-430-P33b Hsa-Mir-430-P34a Hsa-Mir-430-P34b Hsa-Mir-430-P35 Hsa-Mir-430-P36 Hsa-Mir-430-P37a Hsa-Mir-430-P37b Hsa-Mir-430-P37c Hsa-Mir-430-P38 Hsa-Mir-430-P39 Hsa-Mir-430-P40a Hsa-Mir-430-P40b Hsa-Mir-430-P41a Hsa-Mir-430-P41b

Orthologues

Pab-Mir-430-P23 Sha-Mir-430-o23

Node of Origin (locus)

Hominidae

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr19: 53701228-53701288 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P23)

Mir-430-P8b chr19: 53666693-53666750 [+] UCSC Ensembl
Mir-430-P8a chr19: 53669177-53669234 [+] UCSC Ensembl
Mir-430-P9 chr19: 53671978-53672033 [+] UCSC Ensembl
Mir-430-P10 chr19: 53674230-53674289 [+] UCSC Ensembl
Mir-430-P11 chr19: 53675725-53675785 [+] UCSC Ensembl
Mir-430-P12b chr19: 53679016-53679074 [+] UCSC Ensembl
Mir-430-P13 chr19: 53679953-53680011 [+] UCSC Ensembl
Mir-430-P14 chr19: 53682173-53682233 [+] UCSC Ensembl
Mir-430-P12a chr19: 53685022-53685080 [+] UCSC Ensembl
Mir-430-P15 chr19: 53686484-53686543 [+] UCSC Ensembl
Mir-430-P16a chr19: 53688495-53688553 [+] UCSC Ensembl
Mir-430-P17 chr19: 53690895-53690953 [+] UCSC Ensembl
Mir-430-P18 chr19: 53694406-53694464 [+] UCSC Ensembl
Mir-430-P19 chr19: 53695225-53695284 [+] UCSC Ensembl
Mir-430-P20 chr19: 53697547-53697605 [+] UCSC Ensembl
Mir-430-P21 chr19: 53698400-53698458 [+] UCSC Ensembl
Mir-430-P22 chr19: 53700030-53700088 [+] UCSC Ensembl
Mir-430-P23 chr19: 53701228-53701288 [+] UCSC Ensembl
Mir-430-P24 chr19: 53702750-53702808 [+] UCSC Ensembl
Mir-430-P25 chr19: 53706266-53706324 [+] UCSC Ensembl
Mir-430-P26 chr19: 53707468-53707527 [+] UCSC Ensembl
Mir-430-P27 chr19: 53708759-53708817 [+] UCSC Ensembl
Mir-430-P28 chr19: 53711017-53711075 [+] UCSC Ensembl
Mir-430-P29a chr19: 53712282-53712342 [+] UCSC Ensembl
Mir-430-P30 chr19: 53713361-53713422 [+] UCSC Ensembl
Mir-430-P31a chr19: 53716608-53716668 [+] UCSC Ensembl
Mir-430-P32 chr19: 53720111-53720170 [+] UCSC Ensembl
Mir-430-P29b chr19: 53721081-53721139 [+] UCSC Ensembl
Mir-430-P33a chr19: 53722182-53722241 [+] UCSC Ensembl
Mir-430-P34a chr19: 53725457-53725514 [+] UCSC Ensembl
Mir-430-P35 chr19: 53726928-53726982 [+] UCSC Ensembl
Mir-430-P36 chr19: 53729853-53729911 [+] UCSC Ensembl
Mir-430-P37a chr19: 53731019-53731078 [+] UCSC Ensembl
Mir-430-P38 chr19: 53734892-53734950 [+] UCSC Ensembl
Mir-430-P34b chr19: 53736860-53736922 [+] UCSC Ensembl
Mir-430-P37b chr19: 53739348-53739407 [+] UCSC Ensembl
Mir-430-P29c chr19: 53741332-53741390 [+] UCSC Ensembl
Mir-430-P33b chr19: 53742528-53742587 [+] UCSC Ensembl
Mir-430-P31b chr19: 53748650-53748710 [+] UCSC Ensembl
Mir-430-P39 chr19: 53751226-53751285 [+] UCSC Ensembl

Seed

Precursor
(pre-Mir +30nt flank)

UGCCACAGCAAGAAGAUGUCAGGCUGUGUCCCUCUACAGGGAAGCGCUUUCUGUUGUCUGAAAGAAAAGAAAGUGCUUCCUUUUAGAGGGUUACCGUUUAAGAAAAGCAACGUUUAGGUGG

Get precursor sequence

Structure

        10        20          30        40        50          
UGCCACAGCAAGAAGAUGUC--|   U   U       C               GUUGUCU 
                      AGGC GUG CCCUCUA AGGGAAGCGCUUUCU       \
                      UUUG CAU GGGAGAU UUCCUUCGUGAAAGA       G
GGUGGAUUUGCAACGAAAAGAA^   C   U       U               AAAGAAA 
 .       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

No

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

-

+

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Mature sequence

Hsa-Mir-430-P23_5p

mirBase accession

Sequence

0- CCUCUACAGGGAAGCGCUUUCU -22

Get sequence

Star sequence

Hsa-Mir-430-P23_3p*

mirBase accession

Sequence

39- AAAGUGCUUCCUUUUAGAGGGU -61

Get sequence

Proposed targets

microrna.org: MIMAT0002843
TargetScanVert: hsa-miR-520b
miRDB: MIMAT0002843