Mir-430-P26

MirGeneDB ID

Hsa-Mir-430-P26

Family name

MIR-430 (all species)

Seed

AAGUGCU

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-520f

Paralogues

Hsa-Mir-430-P1 Hsa-Mir-430-P2 Hsa-Mir-430-P3 Hsa-Mir-430-P4 Hsa-Mir-430-P5 Hsa-Mir-430-P6 Hsa-Mir-430-P7 Hsa-Mir-430-P8a Hsa-Mir-430-P8b Hsa-Mir-430-P9a Hsa-Mir-430-P9b Hsa-Mir-430-P10 Hsa-Mir-430-P11 Hsa-Mir-430-P12 Hsa-Mir-430-P13 Hsa-Mir-430-P14 Hsa-Mir-430-P15 Hsa-Mir-430-P16 Hsa-Mir-430-P17 Hsa-Mir-430-P18 Hsa-Mir-430-P19 Hsa-Mir-430-P20 Hsa-Mir-430-P21 Hsa-Mir-430-P22 Hsa-Mir-430-P23 Hsa-Mir-430-P24 Hsa-Mir-430-P25 Hsa-Mir-430-P27a Hsa-Mir-430-P27b Hsa-Mir-430-P29a Hsa-Mir-430-P29b Hsa-Mir-430-P31a Hsa-Mir-430-P31b Hsa-Mir-430-P33 Hsa-Mir-430-P34 Hsa-Mir-430-P35a Hsa-Mir-430-P35b Hsa-Mir-430-P35c Hsa-Mir-430-P38 Hsa-Mir-430-P39 Hsa-Mir-430-P41 Hsa-Mir-430-P42 Hsa-Mir-430-P43 Hsa-Mir-430-P44 Hsa-Mir-430-P45 Hsa-Mir-430-P46 Hsa-Mir-430-P47 Hsa-Mir-430-P48 Hsa-Mir-430-P49 Hsa-Mir-430-P50

Orthologues

Mml-Mir-430-P26a Mml-Mir-430-P26b Sha-Mir-430-o26

Node of Origin (locus)

Catarrhini

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr19: 53682173-53682233 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P26)

Mir-430-P8b chr19: 53666693-53666750 [+] UCSC Ensembl
Mir-430-P8a chr19: 53669177-53669234 [+] UCSC Ensembl
Mir-1323 chr19: 53671978-53672033 [+] UCSC Ensembl
Mir-498 chr19: 53674230-53674289 [+] UCSC Ensembl
Mir-430-P25 chr19: 53675725-53675785 [+] UCSC Ensembl
Mir-430-P9b chr19: 53679016-53679074 [+] UCSC Ensembl
Mir-430-P20 chr19: 53679953-53680011 [+] UCSC Ensembl
Mir-430-P26 chr19: 53682173-53682233 [+] UCSC Ensembl
Mir-430-P9a chr19: 53685022-53685080 [+] UCSC Ensembl
Mir-430-P18 chr19: 53686484-53686543 [+] UCSC Ensembl
Mir-430-P49 chr19: 53688495-53688553 [+] UCSC Ensembl
Mir-430-P21 chr19: 53690895-53690953 [+] UCSC Ensembl
Mir-430-P47 chr19: 53694406-53694464 [+] UCSC Ensembl
Mir-430-P17 chr19: 53695225-53695284 [+] UCSC Ensembl
Mir-430-P44 chr19: 53697547-53697605 [+] UCSC Ensembl
Mir-430-P42 chr19: 53698400-53698458 [+] UCSC Ensembl
Mir-430-P14 chr19: 53700030-53700088 [+] UCSC Ensembl
Mir-430-P22 chr19: 53701228-53701288 [+] UCSC Ensembl
Mir-430-P10 chr19: 53702750-53702808 [+] UCSC Ensembl
Mir-430-P45 chr19: 53706266-53706324 [+] UCSC Ensembl
Mir-430-P23 chr19: 53707468-53707527 [+] UCSC Ensembl
Mir-430-P11 chr19: 53708759-53708817 [+] UCSC Ensembl
Mir-430-P43 chr19: 53711017-53711075 [+] UCSC Ensembl
Mir-430-P35a chr19: 53712282-53712342 [+] UCSC Ensembl
Mir-430-P19 chr19: 53713361-53713422 [+] UCSC Ensembl
Mir-430-P29b chr19: 53716608-53716668 [+] UCSC Ensembl
Mir-430-P24 chr19: 53720111-53720170 [+] UCSC Ensembl
Mir-430-P35b chr19: 53721081-53721139 [+] UCSC Ensembl
Mir-430-P27b chr19: 53722182-53722241 [+] UCSC Ensembl
Mir-430-P34 chr19: 53725457-53725514 [+] UCSC Ensembl
Mir-430-P46 chr19: 53726928-53726982 [+] UCSC Ensembl
Mir-430-P13 chr19: 53729853-53729911 [+] UCSC Ensembl
Mir-430-P38 chr19: 53731019-53731078 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UGCUGGAGCAAGAGGAUCUCAGGCUGUGACCCUCUAAAGGGAAGCGCUUUCUGUGGUCAGAAAGAAAAGCAAGUGCUUCCUUUUAGAGGGUUACCGUUUGGGAAAAGCAAUGUUGAAGUUG

Get precursor sequence

Structure

        10          20        30        40        50          
UGCUGGAGCAAGAGGAU--|      U                        U  GUGGUCA 
                   CUCAGGC GUGACCCUCUAAAGGGAAGCGCUU CU       \
                   GGGUUUG CAUUGGGAGAUUUUCCUUCGUGAA GA       G
GUUGAAGUUGUAACGAAAA^      C                        C  AAAGAAA 
 .       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UGUG in loop

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Star sequence

Hsa-Mir-430-P26_5p*

mirBase accession

MIMAT0026609

Sequence

0- CCUCUAAAGGGAAGCGCUUUCU -22

Get sequence

Proposed targets

TargetScanVert: hsa-miR-520f-5p
miRDB: MIMAT0026609

Mature sequence

Hsa-Mir-430-P26_3p

mirBase accession

MIMAT0002830

Sequence

39- CAAGUGCUUCCUUUUAGAGGGU -61

Get sequence

Proposed targets

microrna.org: MIMAT0002830
TargetScanVert: hsa-miR-520f-3p
miRDB: MIMAT0002830