Mir-430-P4

MirGeneDB ID

Hsa-Mir-430-P4

Family name

MIR-430 (all species)

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-302d

Paralogues

Hsa-Mir-430-P1 Hsa-Mir-430-P2 Hsa-Mir-430-P3 Hsa-Mir-430-P5 Hsa-Mir-430-P6 Hsa-Mir-430-P7 Hsa-Mir-430-P8a Hsa-Mir-430-P8b Hsa-Mir-430-P9 Hsa-Mir-430-P10 Hsa-Mir-430-P11 Hsa-Mir-430-P12a Hsa-Mir-430-P12b Hsa-Mir-430-P13 Hsa-Mir-430-P14 Hsa-Mir-430-P15 Hsa-Mir-430-P16a Hsa-Mir-430-P16b Hsa-Mir-430-P17 Hsa-Mir-430-P18 Hsa-Mir-430-P19 Hsa-Mir-430-P20 Hsa-Mir-430-P21 Hsa-Mir-430-P22 Hsa-Mir-430-P23 Hsa-Mir-430-P24 Hsa-Mir-430-P25 Hsa-Mir-430-P26 Hsa-Mir-430-P27 Hsa-Mir-430-P28 Hsa-Mir-430-P29a Hsa-Mir-430-P29b Hsa-Mir-430-P29c Hsa-Mir-430-P30 Hsa-Mir-430-P31a Hsa-Mir-430-P31b Hsa-Mir-430-P32 Hsa-Mir-430-P33a Hsa-Mir-430-P33b Hsa-Mir-430-P34a Hsa-Mir-430-P34b Hsa-Mir-430-P35 Hsa-Mir-430-P36 Hsa-Mir-430-P37a Hsa-Mir-430-P37b Hsa-Mir-430-P37c Hsa-Mir-430-P38 Hsa-Mir-430-P39 Hsa-Mir-430-P40a Hsa-Mir-430-P40b Hsa-Mir-430-P41a Hsa-Mir-430-P41b

Orthologues

Ami-Mir-430-P4 Bta-Mir-430-P4 Cfa-Mir-430-P4 Cja-Mir-430-P4 Cli-Mir-430-P4 Cmi-Mir-430-P4 Cpi-Mir-430-P4 Cpo-Mir-430-P4 Dno-Mir-430-P4 Eca-Mir-430-P4 Ete-Mir-430-P4 Gga-Mir-430-P4 Laf-Mir-430-P4 Mdo-Mir-430-P4 Mml-Mir-430-P4 Mmr-Mir-430-P4 Mmu-Mir-430-P4 Oan-Mir-430-P4 Ocu-Mir-430-P4 Pab-Mir-430-P4 Rno-Mir-430-P4 Spt-Mir-430-P4 Sto-Mir-430-P4 Tgu-Mir-430-P4 Xla-Mir-430-o4a Xla-Mir-430-o4b Xtr-Mir-430-o4

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr4: 112648006-112648066 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P4)

Mir-92-P2a chr4: 112647877-112647936 [-] UCSC Ensembl
Mir-430-P4 chr4: 112648006-112648066 [-] UCSC Ensembl
Mir-430-P3 chr4: 112648186-112648246 [-] UCSC Ensembl
Mir-430-P2 chr4: 112648366-112648425 [-] UCSC Ensembl
Mir-430-P1 chr4: 112648489-112648547 [-] UCSC Ensembl

Seed

AAGUGCU

Precursor
(pre-Mir +30nt flank)

UAUUUUUACAUCUGUUAAGGGGCCCCCUCUACUUUAACAUGGAGGCACUUGCUGUGACAUGACAAAAAUAAGUGCUUCCAUGUUUGAGUGUGGUGGUUCCUACCUAAUCAGCAAUUGCGUU

Get precursor sequence

Structure

        10           20        30        40        50          
UAUUUUUACAUCUGUUA---|      C  UC     U                CUGUGACA 
                    AGGGGCC CC  UACUU AACAUGGAGGCACUUG        \
                    UCCUUGG GG  GUGAG UUGUACCUUCGUGAAU        U
UUGCGUUAACGACUAAUCCA^      U  U-     U                AAAAACAG 
 .       110       100         90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Star sequence

Hsa-Mir-430-P4_5p*

mirBase accession

MIMAT0004685

Sequence

0- ACUUUAACAUGGAGGCACUUGCU -23

Get sequence

Proposed targets

microrna.org: MIMAT0004685
TargetScanVert: hsa-miR-302d-5p
TargetMiner: hsa-miR-302d-5p
miRDB: MIMAT0004685

Mature sequence

Hsa-Mir-430-P4_3p

mirBase accession

MIMAT0000718

Sequence

38- UAAGUGCUUCCAUGUUUGAGUGU -61

Get sequence

Proposed targets

microrna.org: MIMAT0000718
TargetScanVert: hsa-miR-302d-3p
TargetMiner: hsa-miR-302d-3p
miRDB: MIMAT0000718