MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-430-P4

Family name MIR-430 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-302d
Paralogues Eca-Mir-430-P1  Eca-Mir-430-P2  Eca-Mir-430-P3  Eca-Mir-430-P5  Eca-Mir-430-P6  Eca-Mir-430-P7 
Orthologues Ami-Mir-430-P4  Bta-Mir-430-P4  Cfa-Mir-430-P4  Cja-Mir-430-P4  Cli-Mir-430-P4  Cmi-Mir-430-P4  Cpi-Mir-430-P4  Cpo-Mir-430-P4  Dno-Mir-430-P4  Ete-Mir-430-P4  Gga-Mir-430-P4  Hsa-Mir-430-P4  Laf-Mir-430-P4  Mdo-Mir-430-P4  Mml-Mir-430-P4  Mmr-Mir-430-P4  Mmu-Mir-430-P4  Oan-Mir-430-P4  Ocu-Mir-430-P4  Pab-Mir-430-P4  Rno-Mir-430-P4  Spt-Mir-430-P4  Sto-Mir-430-P4  Tgu-Mir-430-P4  Xla-Mir-430-o4a  Xla-Mir-430-o4b  Xtr-Mir-430-o4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009149.1: 114120912-114120972 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P4)		 Mir-430-P1 CM009149.1: 114120447-114120508 [+] UCSC Ensembl
Mir-430-P2 CM009149.1: 114120580-114120639 [+] UCSC Ensembl
Mir-430-P3 CM009149.1: 114120752-114120812 [+] UCSC Ensembl
Mir-430-P4 CM009149.1: 114120912-114120972 [+] UCSC Ensembl
Mir-92-P2a CM009149.1: 114121041-114121100 [+] UCSC Ensembl
Seed AAGUGCU
Precursor
(pre-Mir +30nt flank)		 
GCCUUUUAAAUCUGUUAAGGAACACCCUCUACUUUAACAUGGAGGCACUUGCUGUGACUUGAGAAAAAUAAGUGCUUCCAUGUUUUAGUGUGGUGGUUCCUUUUUAAUCCUCAACCGUGUU
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Structure
        10           20        30        40        50          
GCCUUUUAAAUCUGUUA---|     AC  UC    UU                CUGUGACU 
                    AGGAAC  CC  UACU  AACAUGGAGGCACUUG        \
                    UCCUUG  GG  GUGA  UUGUACCUUCGUGAAU        U
UUGUGCCAACUCCUAAUUUU^     GU  U-    UU                AAAAAGAG 
 .       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-430-P4_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACUUUAACAUGGAGGCACUUGCU -23
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Mature sequence

Eca-Mir-430-P4_3p
mirBase accessionMIMAT0012914
Sequence 
38- UAAGUGCUUCCAUGUUUUAGUGU -61
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