| MirGeneDB ID | Spt-Mir-430-P4 |
|---|---|
| Family name | MIR-430 (all species) |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | Spt-Mir-430-P1 Spt-Mir-430-P2 Spt-Mir-430-P3 |
| Orthologues | Ami-Mir-430-P4 Bta-Mir-430-P4 Cfa-Mir-430-P4 Cja-Mir-430-P4 Cli-Mir-430-P4 Cmi-Mir-430-P4 Cpi-Mir-430-P4 Cpo-Mir-430-P4 Dno-Mir-430-P4 Eca-Mir-430-P4 Ete-Mir-430-P4 Gga-Mir-430-P4 Hsa-Mir-430-P4 Laf-Mir-430-P4 Mdo-Mir-430-P4 Mml-Mir-430-P4 Mmr-Mir-430-P4 Mmu-Mir-430-P4 Oan-Mir-430-P4 Ocu-Mir-430-P4 Pab-Mir-430-P4 Rno-Mir-430-P4 Sto-Mir-430-P4 Tgu-Mir-430-P4 Xla-Mir-430-o4a Xla-Mir-430-o4b Xtr-Mir-430-o4 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01012655.1: 3307778-3307837 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-430-P4) |
Mir-430-P1
QEPC01012655.1: 3307136-3307196 [+]
UCSC
Ensembl
Mir-430-P2 QEPC01012655.1: 3307379-3307436 [+] UCSC Ensembl Mir-430-P3 QEPC01012655.1: 3307625-3307688 [+] UCSC Ensembl Mir-430-P4 QEPC01012655.1: 3307778-3307837 [+] UCSC Ensembl Mir-92-P2a QEPC01012655.1: 3308100-3308159 [+] UCSC Ensembl |
| Seed | AAGUGCU |
| Precursor (pre-Mir +30nt flank) |
GUUCUUGACUAGUCUAAAGGGAUCUCUUCUACUUUAACCUGGAAGUACUUGCUGGAUGUUGAAAAAGUAAGUGCUUCCUUGUUUUAGUUGUGGUGAAUCCUAAAUGCUCAUUUAUGAAACGet precursor sequence |
| Structure | 10 20 30 40 50 GUUCUUGACUAGUCUAA--| A U UCU UU CU GGAUG AGGG UC CU ACU AAC GGAAGUACUUGCU U UCCU AG GG UGA UUG CCUUCGUGAAUGA U CAAAGUAUUUACUCGUAAA^ A U UGU UU UU AAAAG . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Spt-Mir-430-P4_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- ACUUUAACCUGGAAGUACUUGCU -23
Get sequence
|
| Mature sequence | Spt-Mir-430-P4_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- UAAGUGCUUCCUUGUUUUAGUUG -60
Get sequence
|
