MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-430-P4

Family name MIR-430 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID
Paralogues Rno-Mir-430-P1  Rno-Mir-430-P3  Rno-Mir-430-P5a  Rno-Mir-430-P5b  Rno-Mir-430-P5c  Rno-Mir-430-P6a  Rno-Mir-430-P6b  Rno-Mir-430-P7a  Rno-Mir-430-P7b  Rno-Mir-430-P7c 
Orthologues Ami-Mir-430-P4  Bta-Mir-430-P4  Cfa-Mir-430-P4  Cja-Mir-430-P4  Cli-Mir-430-P4  Cmi-Mir-430-P4  Cpi-Mir-430-P4  Cpo-Mir-430-P4  Dno-Mir-430-P4  Eca-Mir-430-P4  Ete-Mir-430-P4  Gga-Mir-430-P4  Hsa-Mir-430-P4  Laf-Mir-430-P4  Mdo-Mir-430-P4  Mml-Mir-430-P4  Mmr-Mir-430-P4  Mmu-Mir-430-P4  Oan-Mir-430-P4  Ocu-Mir-430-P4  Pab-Mir-430-P4  Spt-Mir-430-P4  Sto-Mir-430-P4  Tgu-Mir-430-P4  Xla-Mir-430-o4a  Xla-Mir-430-o4b  Xtr-Mir-430-o4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(rn6)		 chr2: 231875359-231875416 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P4)		 Mir-430-P1 chr2: 231874984-231875043 [+] UCSC Ensembl
Mir-430-P3 chr2: 231875231-231875291 [+] UCSC Ensembl
Mir-430-P4 chr2: 231875359-231875416 [+] UCSC Ensembl
Mir-92-P2a chr2: 231875463-231875522 [+] UCSC Ensembl
Seed AAGUGCU
Precursor
(pre-Mir +30nt flank)		 
UCACUGGAGUCUGCGUAAGGGGCCUCCUUCACUUUAACAUGGAGGCCCUCGCUGUGCCUUUAAAAUAAGUGCUUCCAGGUUUGAGUGUGGUGGCUCCUGCUUACUCCCUGGGCGGCAU
Get precursor sequence
Structure
        10           20        30        40        50        
UCACUGGAGUCUGCGUA---|      U  UU     U   A       C  CGCUGUGC 
                    AGGGGCC CC  CACUU AAC UGGAGGC CU        C
                    UCCUCGG GG  GUGAG UUG ACCUUCG GA        U
UACGGCGGGUCCCUCAUUCG^      U  U-     U   G       U  AUAAAAUU 
      110       100        90         80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
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Star sequence

Rno-Mir-430-P4_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACUUUAACAUGGAGGCCCUCGC -22
Get sequence
Mature sequence

Rno-Mir-430-P4_3p (predicted)
mirBase accessionNone
Sequence 
35- UAAGUGCUUCCAGGUUUGAGUGU -58
Get sequence