MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-430-P5a

Family name MIR-430 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-290
Paralogues Rno-Mir-430-P1  Rno-Mir-430-P3  Rno-Mir-430-P4  Rno-Mir-430-P5b  Rno-Mir-430-P5c  Rno-Mir-430-P6a  Rno-Mir-430-P6b  Rno-Mir-430-P7a  Rno-Mir-430-P7b  Rno-Mir-430-P7c 
Orthologues Bta-Mir-430-P5  Cja-Mir-430-P5  Cpo-Mir-430-P5  Dno-Mir-430-P5  Eca-Mir-430-P5  Ete-Mir-430-P5  Hsa-Mir-430-P5  Laf-Mir-430-P5  Mml-Mir-430-P5  Mmu-Mir-430-P5a  Ocu-Mir-430-P5  Pab-Mir-430-P5  Xtr-Mir-430-o5a1  Xtr-Mir-430-o5a2  Xtr-Mir-430-o5a3  Xtr-Mir-430-o5a4  Xtr-Mir-430-o5a5  Xtr-Mir-430-o5a6  Xtr-Mir-430-o5a7  Xtr-Mir-430-o5a8  Xtr-Mir-430-o5a9  Xtr-Mir-430-o5a10  Xtr-Mir-430-o5a11  Xtr-Mir-430-o5a12  Xtr-Mir-430-o5a13  Xtr-Mir-430-o5a14  Xtr-Mir-430-o5a15  Xtr-Mir-430-o5a16  Xtr-Mir-430-o5a17  Xtr-Mir-430-o5a18  Xtr-Mir-430-o5a19  Xtr-Mir-430-o5a20  Xtr-Mir-430-o5a21  Xtr-Mir-430-o5a22  Xtr-Mir-430-o5a23 
Node of Origin (locus) Muridae
Node of Origin (family) Vertebrata
Genome context
(rn6)		 chr1: 64538716-64538773 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P5a)		 Mir-430-P6b chr1: 64536633-64536691 [-] UCSC Ensembl
Mir-430-P7c chr1: 64536751-64536808 [-] UCSC Ensembl
Mir-430-P5c chr1: 64537114-64537171 [-] UCSC Ensembl
Mir-430-P7b chr1: 64537854-64537910 [-] UCSC Ensembl
Mir-430-P5b chr1: 64538128-64538189 [-] UCSC Ensembl
Mir-430-P7a chr1: 64538418-64538475 [-] UCSC Ensembl
Mir-430-P5a chr1: 64538716-64538773 [-] UCSC Ensembl
Seed CUCAAAC
Precursor
(pre-Mir +30nt flank)		 
UUGCUGCCACCGUGUCUGUCAUCUUGCGGUUCUCAAACUAUGGGGGCACUUUUUUUUUCUUUAAAAAGUGCCGCCAGGUUUUAGGGCCUGCCGGUUGAGAAAACGGCGAUCGGAAACA
Get precursor sequence
Structure
        10          20         30        40        50        
UUGCUGCCACCGUGUCUG--   U  U  -|     C     A   G          UUU 
                    UCA CU GC GGUUCU AAACU UGG GGCACUUUUU   U
                    AGU GG CG CCGGGA UUUGG ACC CCGUGAAAAA   C
ACAAAGGCUAGCGGCAAAAG   U  C  U^     U     -   G          UUU 
      110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
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Mature sequence

Rno-Mir-430-P5a_5p
mirBase accessionMIMAT0000893
Sequence 
0- UCUCAAACUAUGGGGGCACUUUUU -24
Get sequence
Proposed targets microrna.org: MIMAT0000893
TargetScanVert: rno-miR-290
miRDB: MIMAT0000893
Star sequence

Rno-Mir-430-P5a_3p*
mirBase accessionNone
Sequence 
34- AAAGUGCCGCCAGGUUUUAGGGCC -58
Get sequence