MirGeneDB 2.1
420 Rattus norvegicus microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Rno-Let-7-P1b rno-let-7e LET-7 GAGGUAG MIMAT0000777 MIMAT0004706 chr1 59704395 59704461 + Gnathostomata Bilateria No
Rno-Let-7-P1c rno-let-7c-1 LET-7 GAGGUAG MIMAT0000776 MIMAT0017087 chr11 16052888 16052954 + Gnathostomata Bilateria No 1
Rno-Let-7-P1d rno-let-7a-2 LET-7 GAGGUAG MIMAT0000774 MIMAT0017086 chr8 45753280 45753346 + Gnathostomata Bilateria No 1
Rno-Let-7-P2a1 rno-let-7a-1 LET-7 GAGGUAG MIMAT0000774 MIMAT0017085 chr17 16417865 16417936 + Gnathostomata Bilateria Yes
Rno-Let-7-P2a2 rno-let-7c-2 LET-7 GAGGUAG MIMAT0000776 MIMAT0017088 chr7 126590225 126590293 + Gnathostomata Bilateria Yes
Rno-Let-7-P2a3 rno-let-7f-2 LET-7 GAGGUAG MIMAT0000778 MIMAT0017090 chrX 21583279 21583349 + Gnathostomata Bilateria Yes
Rno-Let-7-P2b1 rno-let-7f-1 LET-7 GAGGUAG MIMAT0000778 MIMAT0017089 chr17 16418228 16418304 + Gnathostomata Bilateria Yes 1 1
Rno-Let-7-P2b2 rno-let-7b LET-7 GAGGUAG MIMAT0000775 MIMAT0004705 chr7 126590633 126590707 + Gnathostomata Bilateria Yes 1
Rno-Let-7-P2b3 rno-mir-98 LET-7 GAGGUAG MIMAT0000819 MIMAT0017111 chrX 21583890 21583968 + Gnathostomata Bilateria Yes 1 1
Rno-Let-7-P2c1 rno-let-7d LET-7 GAGGUAG MIMAT0000562 MIMAT0000563 chr17 16419993 16420067 + Gnathostomata Bilateria Yes 1
Rno-Let-7-P2c2 rno-let-7i LET-7 GAGGUAG MIMAT0000779 MIMAT0004707 chr7 66802736 66802812 + Gnathostomata Bilateria Yes 1
Rno-Let-7-P2c3 rno-let-7g LET-7 GAGGUAG MIMAT0035719 MIMAT0035720 chr8 114874463 114874540 + Gnathostomata Bilateria Yes 1
Rno-Mir-1-P1 rno-mir-1 MIR-1 GGAAUGU MIMAT0003162 MIMAT0003125 chr18 2054945 2055005 - Gnathostomata Bilateria No 1 1
Rno-Mir-1-P2 rno-mir-206 MIR-1 GGAAUGU MIMAT0017154 MIMAT0000879 chr9 26791776 26791835 + Gnathostomata Bilateria No 1
Rno-Mir-1-P3 rno-mir-1b MIR-1 GGAAUGU None MIMAT0037263 chr3 175769728 175769788 + Gnathostomata Bilateria No
Rno-Mir-7-P1 rno-mir-7a-2 MIR-7 GGAAGAC MIMAT0000606 MIMAT0017091 chr1 140576414 140576473 + Gnathostomata Bilateria No 1 1
Rno-Mir-7-P2 rno-mir-7a-1 MIR-7 GGAAGAC MIMAT0000606 MIMAT0000607 chr17 6675034 6675097 + Gnathostomata Bilateria No 1
Rno-Mir-7-P4 rno-mir-7b MIR-7 GGAAGAC MIMAT0000780 None chr9 10812454 10812513 - Gnathostomata Bilateria No 1
Rno-Mir-8-P1a rno-mir-200b MIR-8 AAUACUG MIMAT0017152 MIMAT0000875 chr5 173490160 173490218 - Vertebrata Bilateria No 1 1
Rno-Mir-8-P1b rno-mir-200c MIR-8 AAUACUG MIMAT0017150 MIMAT0000873 chr4 157236788 157236850 - Vertebrata Bilateria No 1 1 1
Rno-Mir-8-P2a rno-mir-200a MIR-8 AACACUG MIMAT0017151 MIMAT0000874 chr5 173489379 173489439 - Vertebrata Bilateria No 1
Rno-Mir-8-P2b rno-mir-141 MIR-8 AACACUG MIMAT0017128 MIMAT0000846 chr4 157236360 157236424 - Vertebrata Bilateria No 1
Rno-Mir-8-P3a rno-mir-429 MIR-8 AAUACUG None MIMAT0001538 chr5 173488342 173488400 - Vertebrata Bilateria No 1
Rno-Mir-9-P1 rno-mir-9a-3 MIR-9 CUUUGGU MIMAT0000781 MIMAT0004708 chr1 141229368 141229429 + Gnathostomata Bilateria No 1 1
Rno-Mir-9-P2 rno-mir-9a-2 MIR-9 CUUUGGU MIMAT0000781 MIMAT0004708 chr2 11884686 11884745 + Gnathostomata Bilateria No 1 1
Rno-Mir-9-P3 rno-mir-9a-1 MIR-9 CUUUGGU MIMAT0000781 MIMAT0004708 chr2 187582814 187582875 + Gnathostomata Bilateria No 1 1
Rno-Mir-10-P1b-v1 rno-mir-10b MIR-10 ACCCUGU MIMAT0000783 MIMAT0017092 chr3 61648003 61648064 + Gnathostomata Eumetazoa No 1 1
Rno-Mir-10-P1b-v2 rno-mir-10b MIR-10 CCCUGUA MIMAT0000783 MIMAT0017092 chr3 61648004 61648063 + Gnathostomata Eumetazoa No
Rno-Mir-10-P1c-v1 rno-mir-10a MIR-10 ACCCUGU MIMAT0000782 MIMAT0004709 chr10 84165971 84166033 + Gnathostomata Eumetazoa No 1
Rno-Mir-10-P1c-v2 rno-mir-10a MIR-10 CCCUGUA MIMAT0000782 MIMAT0004709 chr10 84165972 84166032 + Gnathostomata Eumetazoa No 1
Rno-Mir-10-P2b rno-mir-99b MIR-10 ACCCGUA MIMAT0000821 MIMAT0004725 chr1 59704222 59704281 + Gnathostomata Eumetazoa Yes 1
Rno-Mir-10-P2c rno-mir-99a MIR-10 ACCCGUA MIMAT0000820 MIMAT0004724 chr11 16052165 16052223 + Gnathostomata Eumetazoa Yes 1 1
Rno-Mir-10-P2d rno-mir-100 MIR-10 ACCCGUA MIMAT0000822 MIMAT0017112 chr8 45746960 45747016 + Gnathostomata Eumetazoa No 1
Rno-Mir-10-P3b rno-mir-125a MIR-10 CCCUGAG MIMAT0000829 MIMAT0004729 chr1 59704841 59704900 + Gnathostomata Eumetazoa No 1 1
Rno-Mir-10-P3c rno-mir-125b-2 MIR-10 CCCUGAG MIMAT0000830 MIMAT0026467 chr11 16097362 16097422 + Gnathostomata Eumetazoa No 1
Rno-Mir-10-P3d rno-mir-125b-1 MIR-10 CCCUGAG MIMAT0000830 MIMAT0004730 chr8 45798274 45798335 + Gnathostomata Eumetazoa No 1 1 1
Rno-Mir-15-P1a rno-mir-15a MIR-15 AGCAGCA MIMAT0035728 MIMAT0035729 901866519 202 260 + Gnathostomata Olfactores No 1
Rno-Mir-15-P1b rno-mir-15b MIR-15 AGCAGCA MIMAT0000784 MIMAT0017093 chr2 165605942 165606001 + Gnathostomata Olfactores No
Rno-Mir-15-P1c3 rno-mir-322-1 MIR-15 AGCAGCA MIMAT0001619 MIMAT0000547 chrX 158584564 158584621 + R. norvegicus Olfactores No
Rno-Mir-15-P1c4 rno-mir-322-2 MIR-15 AGCAGCA MIMAT0001619 MIMAT0000547 chrX 158148183 158148240 + R. norvegicus Olfactores No
Rno-Mir-15-P1d rno-mir-497 MIR-15 AGCAGCA MIMAT0003383 MIMAT0017230 chr10 56844978 56845039 + Gnathostomata Olfactores No 1
Rno-Mir-15-P2a None MIR-15 AGCAGCA None None 901866519 341 405 + Gnathostomata Olfactores No 1 1
Rno-Mir-15-P2b rno-mir-16 MIR-15 AGCAGCA MIMAT0000785 MIMAT0017094 chr2 165606088 165606152 + Gnathostomata Olfactores No 1
Rno-Mir-15-P2c3 rno-mir-503-1 MIR-15 AGCAGCG MIMAT0003213 MIMAT0017224 chrX 158584862 158584924 + R. norvegicus Olfactores No 1
Rno-Mir-15-P2c4 rno-mir-503-2 MIR-15 AGCAGCG MIMAT0003213 MIMAT0017224 chrX 158148481 158148543 + R. norvegicus Olfactores No 1
Rno-Mir-15-P2d rno-mir-195 MIR-15 AGCAGCA MIMAT0000870 MIMAT0017149 chr10 56845315 56845375 + Gnathostomata Olfactores No 1
Rno-Mir-17-P1a rno-mir-17-1 MIR-17 AAAGUGC MIMAT0000786 MIMAT0004710 chr15 100179892 100179951 + Gnathostomata Vertebrata No 1
Rno-Mir-17-P1c rno-mir-17-2 MIR-17 AAAGUGC MIMAT0000786 MIMAT0017295 chrX 140117900 140117958 - Gnathostomata Vertebrata No 1
Rno-Mir-17-P1d rno-mir-106b MIR-17 AAAGUGC MIMAT0000825 MIMAT0004727 chr12 19307761 19307822 - Gnathostomata Vertebrata No 1 1
Rno-Mir-17-P2a rno-mir-18a MIR-17 AAGGUGC MIMAT0000787 MIMAT0017095 chr15 100180031 100180095 + Gnathostomata Vertebrata No 1
Rno-Mir-17-P2c None MIR-17 AAGGUGC None None chrX 140117734 140117798 - Gnathostomata Vertebrata No 1 1
Rno-Mir-17-P4a rno-mir-20a MIR-17 AAAGUGC MIMAT0000602 MIMAT0000603 chr15 100180349 100180407 + Gnathostomata Vertebrata No 1 1
Rno-Mir-17-P4c rno-mir-20b MIR-17 AAAGUGC MIMAT0003211 MIMAT0003212 chrX 140117522 140117582 - Gnathostomata Vertebrata No
Rno-Mir-17-P4d rno-mir-93 MIR-17 AAAGUGC MIMAT0000817 MIMAT0017109 chr12 19307555 19307615 - Gnathostomata Vertebrata No 1
Rno-Mir-19-P1a rno-mir-19a MIR-19 GUGCAAA MIMAT0017098 MIMAT0000789 chr15 100180175 100180232 + Gnathostomata Vertebrata No 1 1
Rno-Mir-19-P2a rno-mir-19b-1 MIR-19 GUGCAAA MIMAT0017096 MIMAT0000788 chr15 100180479 100180539 + Gnathostomata Vertebrata No 1
Rno-Mir-19-P2c rno-mir-19b-2 MIR-19 GUGCAAA MIMAT0017097 MIMAT0000788 chrX 140117391 140117456 - Gnathostomata Vertebrata No 1
Rno-Mir-21 rno-mir-21 MIR-21 AGCUUAU MIMAT0000790 MIMAT0004711 chr10 73902225 73902284 - Vertebrata Vertebrata No
Rno-Mir-22-P1b rno-mir-22 MIR-22 AGCUGCC MIMAT0003152 MIMAT0000791 chr10 62299610 62299669 + Vertebrata Bilateria No 1 1
Rno-Mir-23-P2 rno-mir-23b MIR-23 UCACAUU MIMAT0017099 MIMAT0000793 chr17 823242 823301 + Gnathostomata Vertebrata Yes 1 1 1
Rno-Mir-23-P3 rno-mir-23a MIR-23 UCACAUU MIMAT0004712 MIMAT0000792 chr19 25318591 25318649 + Gnathostomata Vertebrata No 1
Rno-Mir-24-P2 rno-mir-24-1 MIR-24 GGCUCAG MIMAT0003153 MIMAT0000794 chr17 823973 824032 + Gnathostomata Vertebrata Yes
Rno-Mir-24-P3 rno-mir-24-2 MIR-24 GGCUCAG MIMAT0005441 MIMAT0000794 chr19 25318887 25318944 + Gnathostomata Vertebrata Yes
Rno-Mir-26-P1 rno-mir-26a MIR-26 UCAAGUA MIMAT0000796 MIMAT0017100 chr8 127714456 127714516 + Gnathostomata Vertebrata No 1 1
Rno-Mir-26-P2 rno-mir-26b MIR-26 UCAAGUA MIMAT0000797 MIMAT0004714 chr9 81675289 81675346 + Gnathostomata Vertebrata No 1 1 1
Rno-Mir-26-P4 None MIR-26 UCAAGUA None None chr7 70287326 70287385 + Gnathostomata Vertebrata No 1
Rno-Mir-27-P2 rno-mir-27b MIR-27 UCACAGU MIMAT0017101 MIMAT0000798 chr17 823479 823541 + Gnathostomata Vertebrata No 1
Rno-Mir-27-P3 rno-mir-27a MIR-27 UCACAGU MIMAT0004715 MIMAT0000799 chr19 25318749 25318811 + Gnathostomata Vertebrata No 1
Rno-Mir-28-P1 rno-mir-28 MIR-28 AGGAGCU MIMAT0000800 MIMAT0004716 chr11 79380534 79380595 - Eutheria Eutheria No 1 1
Rno-Mir-28-P2 rno-mir-151 MIR-28 CGAGGAG MIMAT0000613 MIMAT0000614 chr7 114485573 114485628 - Eutheria Eutheria No 1 1
Rno-Mir-28-P3 rno-mir-708 MIR-28 AGGAGCU MIMAT0005331 MIMAT0005332 chr1 161221256 161221324 + Eutheria Eutheria No 1
Rno-Mir-29-P1b-v1 rno-mir-29b-1 MIR-29 AGCACCA MIMAT0005445 MIMAT0000801 chr4 58344318 58344381 - Gnathostomata Bilateria No 1
Rno-Mir-29-P1b-v2 rno-mir-29b-1 MIR-29 UAGCACC MIMAT0005445 MIMAT0000801 chr4 58344319 58344380 - Gnathostomata Bilateria No 1
Rno-Mir-29-P1d5-v1 rno-mir-29b-2 MIR-29 AGCACCA MIMAT0004717 MIMAT0000801 chr13 113782066 113782130 + R. norvegicus Bilateria No 1
Rno-Mir-29-P1d5-v2 rno-mir-29b-3 MIR-29 UAGCACC MIMAT0004717 MIMAT0000801 chr13 113782067 113782129 + R. norvegicus Bilateria No 1
Rno-Mir-29-P1d6-v1 rno-mir-29b-2 MIR-29 AGCACCA MIMAT0004717 MIMAT0000801 chr1 38238385 38238449 + R. norvegicus Bilateria No 1
Rno-Mir-29-P1d6-v2 rno-mir-29b-3 MIR-29 UAGCACC MIMAT0004717 MIMAT0000801 chr1 38238386 38238448 + R. norvegicus Bilateria No 1
Rno-Mir-29-P2b rno-mir-29a MIR-29 AGCACCA MIMAT0004718 MIMAT0000802 chr4 58343944 58344003 - Gnathostomata Bilateria No 1
Rno-Mir-29-P2d5 rno-mir-29c-1 MIR-29 AGCACCA MIMAT0003154 MIMAT0000803 chr13 113782602 113782659 + R. norvegicus Bilateria No 1
Rno-Mir-29-P2d6 rno-mir-29c-2 MIR-29 AGCACCA MIMAT0003154 MIMAT0000803 chr1 38238921 38238978 + R. norvegicus Bilateria No 1
Rno-Mir-30-P1a rno-mir-30d MIR-30 GUAAACA MIMAT0000807 MIMAT0004722 chr7 109286472 109286533 - Gnathostomata Vertebrata No 1
Rno-Mir-30-P1b rno-mir-30a MIR-30 GUAAACA MIMAT0000808 MIMAT0000809 chr9 29542640 29542702 + Gnathostomata Vertebrata No 1 1 1
Rno-Mir-30-P1d rno-mir-30e MIR-30 GUAAACA MIMAT0000805 MIMAT0004720 chr5 139702884 139702947 - Gnathostomata Vertebrata No 1
Rno-Mir-30-P2a rno-mir-30b MIR-30 GUAAACA MIMAT0000806 MIMAT0004721 901814657 125 184 - Gnathostomata Vertebrata No 1
Rno-Mir-30-P2b rno-mir-30c-2 MIR-30 GUAAACA MIMAT0000804 MIMAT0005442 chr9 29562389 29562450 + Gnathostomata Vertebrata No 1 1 1
Rno-Mir-30-P2d rno-mir-30c-1 MIR-30 GUAAACA MIMAT0000804 MIMAT0004719 chr5 139699889 139699949 - Gnathostomata Vertebrata No 1 1
Rno-Mir-31 rno-mir-31a MIR-31 GGCAAGA MIMAT0000810 MIMAT0017102 chr5 107206542 107206600 + Bilateria Bilateria No 1 1
Rno-Mir-32 rno-mir-32 MIR-32 AUUGCAC MIMAT0000811 MIMAT0017103 chr5 73934258 73934319 - Gnathostomata Gnathostomata No 1 1
Rno-Mir-33-P3 rno-mir-33 MIR-33 UGCAUUG MIMAT0000812 MIMAT0017104 chr7 123431617 123431677 + Gnathostomata Bilateria Yes 1 1
Rno-Mir-34-P1 rno-mir-34a MIR-34 GGCAGUG MIMAT0000815 MIMAT0017106 chr5 167092510 167092575 + Gnathostomata Bilateria No 1 1
Rno-Mir-34-P2a rno-mir-34b MIR-34 GGCAGUG MIMAT0000813 MIMAT0017105 chr8 55492554 55492612 - Gnathostomata Bilateria No 1
Rno-Mir-34-P2b rno-mir-34c MIR-34 GGCAGUG MIMAT0000814 MIMAT0004723 chr8 55492034 55492088 - Gnathostomata Bilateria No 1 1
Rno-Mir-34-P3a rno-mir-449c MIR-34 GGCAGUG MIMAT0017803 MIMAT0017804 chr2 44896085 44896147 + Gnathostomata Bilateria Unknown 1
Rno-Mir-34-P3b None MIR-34 GGCAGUG None None chr2 44897502 44897562 + Gnathostomata Bilateria Unknown 1 1
Rno-Mir-34-P3c rno-mir-449a MIR-34 GGCAGUG MIMAT0001543 MIMAT0017181 chr2 44897616 44897677 + Gnathostomata Bilateria No 1 1
Rno-Mir-92-P1a rno-mir-92a-1 MIR-92 AUUGCAC MIMAT0017107 MIMAT0000816 chr15 100180596 100180654 + Gnathostomata Bilateria No 1
Rno-Mir-92-P1c rno-mir-92a-2 MIR-92 AUUGCAC MIMAT0017108 MIMAT0000816 chrX 140117265 140117325 - Gnathostomata Bilateria No 1
Rno-Mir-92-P1d rno-mir-92b MIR-92 AUUGCAC MIMAT0017319 MIMAT0005340 chr2 188541044 188541106 - Gnathostomata Bilateria No 1