Mir
Gene
DB
2.1
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420 Rattus norvegicus microRNA genes
Sort by genome coordinates
Motifs
Tissue expression
-
+
MirGeneDB ID
▲
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Ad
Ad
Br
Br
Br
Ce
Ce
Ce
Ce
Co
Co
Co
Co
Dr
Dr
Du
Du
Du
Du
He
He
Hi
Hi
Il
Il
Je
Je
Ki
Ki
Ki
Ki
Li
Li
Li
Li
Me
Me
Mu
Mu
Mu
Mu
Mu
Mu
Mu
Mu
Ov
Pa
Pa
St
St
St
Te
Ut
Wh
Br
Fa
He
Ki
La
Li
Li
Lu
Mu
Pa
Sk
Sm
Sp
St
Te
Th
Rno-Let-7-P1b
rno-let-7e
LET-7
GAGGUAG
MIMAT0000777
MIMAT0004706
chr1
59704395
59704461
+
Gnathostomata
Bilateria
No
Rno-Let-7-P1c
rno-let-7c-1
LET-7
GAGGUAG
MIMAT0000776
MIMAT0017087
chr11
16052888
16052954
+
Gnathostomata
Bilateria
No
1
Rno-Let-7-P1d
rno-let-7a-2
LET-7
GAGGUAG
MIMAT0000774
MIMAT0017086
chr8
45753280
45753346
+
Gnathostomata
Bilateria
No
1
Rno-Let-7-P2a1
rno-let-7a-1
LET-7
GAGGUAG
MIMAT0000774
MIMAT0017085
chr17
16417865
16417936
+
Gnathostomata
Bilateria
Yes
Rno-Let-7-P2a2
rno-let-7c-2
LET-7
GAGGUAG
MIMAT0000776
MIMAT0017088
chr7
126590225
126590293
+
Gnathostomata
Bilateria
Yes
Rno-Let-7-P2a3
rno-let-7f-2
LET-7
GAGGUAG
MIMAT0000778
MIMAT0017090
chrX
21583279
21583349
+
Gnathostomata
Bilateria
Yes
Rno-Let-7-P2b1
rno-let-7f-1
LET-7
GAGGUAG
MIMAT0000778
MIMAT0017089
chr17
16418228
16418304
+
Gnathostomata
Bilateria
Yes
1
1
Rno-Let-7-P2b2
rno-let-7b
LET-7
GAGGUAG
MIMAT0000775
MIMAT0004705
chr7
126590633
126590707
+
Gnathostomata
Bilateria
Yes
1
Rno-Let-7-P2b3
rno-mir-98
LET-7
GAGGUAG
MIMAT0000819
MIMAT0017111
chrX
21583890
21583968
+
Gnathostomata
Bilateria
Yes
1
1
Rno-Let-7-P2c1
rno-let-7d
LET-7
GAGGUAG
MIMAT0000562
MIMAT0000563
chr17
16419993
16420067
+
Gnathostomata
Bilateria
Yes
1
Rno-Let-7-P2c2
rno-let-7i
LET-7
GAGGUAG
MIMAT0000779
MIMAT0004707
chr7
66802736
66802812
+
Gnathostomata
Bilateria
Yes
1
Rno-Let-7-P2c3
rno-let-7g
LET-7
GAGGUAG
MIMAT0035719
MIMAT0035720
chr8
114874463
114874540
+
Gnathostomata
Bilateria
Yes
1
Rno-Mir-1-P1
rno-mir-1
MIR-1
GGAAUGU
MIMAT0003162
MIMAT0003125
chr18
2054945
2055005
-
Gnathostomata
Bilateria
No
1
1
Rno-Mir-1-P2
rno-mir-206
MIR-1
GGAAUGU
MIMAT0017154
MIMAT0000879
chr9
26791776
26791835
+
Gnathostomata
Bilateria
No
1
Rno-Mir-1-P3
rno-mir-1b
MIR-1
GGAAUGU
None
MIMAT0037263
chr3
175769728
175769788
+
Gnathostomata
Bilateria
No
Rno-Mir-7-P1
rno-mir-7a-2
MIR-7
GGAAGAC
MIMAT0000606
MIMAT0017091
chr1
140576414
140576473
+
Gnathostomata
Bilateria
No
1
1
Rno-Mir-7-P2
rno-mir-7a-1
MIR-7
GGAAGAC
MIMAT0000606
MIMAT0000607
chr17
6675034
6675097
+
Gnathostomata
Bilateria
No
1
Rno-Mir-7-P4
rno-mir-7b
MIR-7
GGAAGAC
MIMAT0000780
None
chr9
10812454
10812513
-
Gnathostomata
Bilateria
No
1
Rno-Mir-8-P1a
rno-mir-200b
MIR-8
AAUACUG
MIMAT0017152
MIMAT0000875
chr5
173490160
173490218
-
Vertebrata
Bilateria
No
1
1
Rno-Mir-8-P1b
rno-mir-200c
MIR-8
AAUACUG
MIMAT0017150
MIMAT0000873
chr4
157236788
157236850
-
Vertebrata
Bilateria
No
1
1
1
Rno-Mir-8-P2a
rno-mir-200a
MIR-8
AACACUG
MIMAT0017151
MIMAT0000874
chr5
173489379
173489439
-
Vertebrata
Bilateria
No
1
Rno-Mir-8-P2b
rno-mir-141
MIR-8
AACACUG
MIMAT0017128
MIMAT0000846
chr4
157236360
157236424
-
Vertebrata
Bilateria
No
1
Rno-Mir-8-P3a
rno-mir-429
MIR-8
AAUACUG
None
MIMAT0001538
chr5
173488342
173488400
-
Vertebrata
Bilateria
No
1
Rno-Mir-9-P1
rno-mir-9a-3
MIR-9
CUUUGGU
MIMAT0000781
MIMAT0004708
chr1
141229368
141229429
+
Gnathostomata
Bilateria
No
1
1
Rno-Mir-9-P2
rno-mir-9a-2
MIR-9
CUUUGGU
MIMAT0000781
MIMAT0004708
chr2
11884686
11884745
+
Gnathostomata
Bilateria
No
1
1
Rno-Mir-9-P3
rno-mir-9a-1
MIR-9
CUUUGGU
MIMAT0000781
MIMAT0004708
chr2
187582814
187582875
+
Gnathostomata
Bilateria
No
1
1
Rno-Mir-10-P1b-v1
rno-mir-10b
MIR-10
ACCCUGU
MIMAT0000783
MIMAT0017092
chr3
61648003
61648064
+
Gnathostomata
Eumetazoa
No
1
1
Rno-Mir-10-P1b-v2
rno-mir-10b
MIR-10
CCCUGUA
MIMAT0000783
MIMAT0017092
chr3
61648004
61648063
+
Gnathostomata
Eumetazoa
No
Rno-Mir-10-P1c-v1
rno-mir-10a
MIR-10
ACCCUGU
MIMAT0000782
MIMAT0004709
chr10
84165971
84166033
+
Gnathostomata
Eumetazoa
No
1
Rno-Mir-10-P1c-v2
rno-mir-10a
MIR-10
CCCUGUA
MIMAT0000782
MIMAT0004709
chr10
84165972
84166032
+
Gnathostomata
Eumetazoa
No
1
Rno-Mir-10-P2b
rno-mir-99b
MIR-10
ACCCGUA
MIMAT0000821
MIMAT0004725
chr1
59704222
59704281
+
Gnathostomata
Eumetazoa
Yes
1
Rno-Mir-10-P2c
rno-mir-99a
MIR-10
ACCCGUA
MIMAT0000820
MIMAT0004724
chr11
16052165
16052223
+
Gnathostomata
Eumetazoa
Yes
1
1
Rno-Mir-10-P2d
rno-mir-100
MIR-10
ACCCGUA
MIMAT0000822
MIMAT0017112
chr8
45746960
45747016
+
Gnathostomata
Eumetazoa
No
1
Rno-Mir-10-P3b
rno-mir-125a
MIR-10
CCCUGAG
MIMAT0000829
MIMAT0004729
chr1
59704841
59704900
+
Gnathostomata
Eumetazoa
No
1
1
Rno-Mir-10-P3c
rno-mir-125b-2
MIR-10
CCCUGAG
MIMAT0000830
MIMAT0026467
chr11
16097362
16097422
+
Gnathostomata
Eumetazoa
No
1
Rno-Mir-10-P3d
rno-mir-125b-1
MIR-10
CCCUGAG
MIMAT0000830
MIMAT0004730
chr8
45798274
45798335
+
Gnathostomata
Eumetazoa
No
1
1
1
Rno-Mir-15-P1a
rno-mir-15a
MIR-15
AGCAGCA
MIMAT0035728
MIMAT0035729
901866519
202
260
+
Gnathostomata
Olfactores
No
1
Rno-Mir-15-P1b
rno-mir-15b
MIR-15
AGCAGCA
MIMAT0000784
MIMAT0017093
chr2
165605942
165606001
+
Gnathostomata
Olfactores
No
Rno-Mir-15-P1c3
rno-mir-322-1
MIR-15
AGCAGCA
MIMAT0001619
MIMAT0000547
chrX
158584564
158584621
+
R. norvegicus
Olfactores
No
Rno-Mir-15-P1c4
rno-mir-322-2
MIR-15
AGCAGCA
MIMAT0001619
MIMAT0000547
chrX
158148183
158148240
+
R. norvegicus
Olfactores
No
Rno-Mir-15-P1d
rno-mir-497
MIR-15
AGCAGCA
MIMAT0003383
MIMAT0017230
chr10
56844978
56845039
+
Gnathostomata
Olfactores
No
1
Rno-Mir-15-P2a
None
MIR-15
AGCAGCA
None
None
901866519
341
405
+
Gnathostomata
Olfactores
No
1
1
Rno-Mir-15-P2b
rno-mir-16
MIR-15
AGCAGCA
MIMAT0000785
MIMAT0017094
chr2
165606088
165606152
+
Gnathostomata
Olfactores
No
1
Rno-Mir-15-P2c3
rno-mir-503-1
MIR-15
AGCAGCG
MIMAT0003213
MIMAT0017224
chrX
158584862
158584924
+
R. norvegicus
Olfactores
No
1
Rno-Mir-15-P2c4
rno-mir-503-2
MIR-15
AGCAGCG
MIMAT0003213
MIMAT0017224
chrX
158148481
158148543
+
R. norvegicus
Olfactores
No
1
Rno-Mir-15-P2d
rno-mir-195
MIR-15
AGCAGCA
MIMAT0000870
MIMAT0017149
chr10
56845315
56845375
+
Gnathostomata
Olfactores
No
1
Rno-Mir-17-P1a
rno-mir-17-1
MIR-17
AAAGUGC
MIMAT0000786
MIMAT0004710
chr15
100179892
100179951
+
Gnathostomata
Vertebrata
No
1
Rno-Mir-17-P1c
rno-mir-17-2
MIR-17
AAAGUGC
MIMAT0000786
MIMAT0017295
chrX
140117900
140117958
-
Gnathostomata
Vertebrata
No
1
Rno-Mir-17-P1d
rno-mir-106b
MIR-17
AAAGUGC
MIMAT0000825
MIMAT0004727
chr12
19307761
19307822
-
Gnathostomata
Vertebrata
No
1
1
Rno-Mir-17-P2a
rno-mir-18a
MIR-17
AAGGUGC
MIMAT0000787
MIMAT0017095
chr15
100180031
100180095
+
Gnathostomata
Vertebrata
No
1
Rno-Mir-17-P2c
None
MIR-17
AAGGUGC
None
None
chrX
140117734
140117798
-
Gnathostomata
Vertebrata
No
1
1
Rno-Mir-17-P4a
rno-mir-20a
MIR-17
AAAGUGC
MIMAT0000602
MIMAT0000603
chr15
100180349
100180407
+
Gnathostomata
Vertebrata
No
1
1
Rno-Mir-17-P4c
rno-mir-20b
MIR-17
AAAGUGC
MIMAT0003211
MIMAT0003212
chrX
140117522
140117582
-
Gnathostomata
Vertebrata
No
Rno-Mir-17-P4d
rno-mir-93
MIR-17
AAAGUGC
MIMAT0000817
MIMAT0017109
chr12
19307555
19307615
-
Gnathostomata
Vertebrata
No
1
Rno-Mir-19-P1a
rno-mir-19a
MIR-19
GUGCAAA
MIMAT0017098
MIMAT0000789
chr15
100180175
100180232
+
Gnathostomata
Vertebrata
No
1
1
Rno-Mir-19-P2a
rno-mir-19b-1
MIR-19
GUGCAAA
MIMAT0017096
MIMAT0000788
chr15
100180479
100180539
+
Gnathostomata
Vertebrata
No
1
Rno-Mir-19-P2c
rno-mir-19b-2
MIR-19
GUGCAAA
MIMAT0017097
MIMAT0000788
chrX
140117391
140117456
-
Gnathostomata
Vertebrata
No
1
Rno-Mir-21
rno-mir-21
MIR-21
AGCUUAU
MIMAT0000790
MIMAT0004711
chr10
73902225
73902284
-
Vertebrata
Vertebrata
No
Rno-Mir-22-P1b
rno-mir-22
MIR-22
AGCUGCC
MIMAT0003152
MIMAT0000791
chr10
62299610
62299669
+
Vertebrata
Bilateria
No
1
1
Rno-Mir-23-P2
rno-mir-23b
MIR-23
UCACAUU
MIMAT0017099
MIMAT0000793
chr17
823242
823301
+
Gnathostomata
Vertebrata
Yes
1
1
1
Rno-Mir-23-P3
rno-mir-23a
MIR-23
UCACAUU
MIMAT0004712
MIMAT0000792
chr19
25318591
25318649
+
Gnathostomata
Vertebrata
No
1
Rno-Mir-24-P2
rno-mir-24-1
MIR-24
GGCUCAG
MIMAT0003153
MIMAT0000794
chr17
823973
824032
+
Gnathostomata
Vertebrata
Yes
Rno-Mir-24-P3
rno-mir-24-2
MIR-24
GGCUCAG
MIMAT0005441
MIMAT0000794
chr19
25318887
25318944
+
Gnathostomata
Vertebrata
Yes
Rno-Mir-26-P1
rno-mir-26a
MIR-26
UCAAGUA
MIMAT0000796
MIMAT0017100
chr8
127714456
127714516
+
Gnathostomata
Vertebrata
No
1
1
Rno-Mir-26-P2
rno-mir-26b
MIR-26
UCAAGUA
MIMAT0000797
MIMAT0004714
chr9
81675289
81675346
+
Gnathostomata
Vertebrata
No
1
1
1
Rno-Mir-26-P4
None
MIR-26
UCAAGUA
None
None
chr7
70287326
70287385
+
Gnathostomata
Vertebrata
No
1
Rno-Mir-27-P2
rno-mir-27b
MIR-27
UCACAGU
MIMAT0017101
MIMAT0000798
chr17
823479
823541
+
Gnathostomata
Vertebrata
No
1
Rno-Mir-27-P3
rno-mir-27a
MIR-27
UCACAGU
MIMAT0004715
MIMAT0000799
chr19
25318749
25318811
+
Gnathostomata
Vertebrata
No
1
Rno-Mir-28-P1
rno-mir-28
MIR-28
AGGAGCU
MIMAT0000800
MIMAT0004716
chr11
79380534
79380595
-
Eutheria
Eutheria
No
1
1
Rno-Mir-28-P2
rno-mir-151
MIR-28
CGAGGAG
MIMAT0000613
MIMAT0000614
chr7
114485573
114485628
-
Eutheria
Eutheria
No
1
1
Rno-Mir-28-P3
rno-mir-708
MIR-28
AGGAGCU
MIMAT0005331
MIMAT0005332
chr1
161221256
161221324
+
Eutheria
Eutheria
No
1
Rno-Mir-29-P1b-v1
rno-mir-29b-1
MIR-29
AGCACCA
MIMAT0005445
MIMAT0000801
chr4
58344318
58344381
-
Gnathostomata
Bilateria
No
1
Rno-Mir-29-P1b-v2
rno-mir-29b-1
MIR-29
UAGCACC
MIMAT0005445
MIMAT0000801
chr4
58344319
58344380
-
Gnathostomata
Bilateria
No
1
Rno-Mir-29-P1d5-v1
rno-mir-29b-2
MIR-29
AGCACCA
MIMAT0004717
MIMAT0000801
chr13
113782066
113782130
+
R. norvegicus
Bilateria
No
1
Rno-Mir-29-P1d5-v2
rno-mir-29b-3
MIR-29
UAGCACC
MIMAT0004717
MIMAT0000801
chr13
113782067
113782129
+
R. norvegicus
Bilateria
No
1
Rno-Mir-29-P1d6-v1
rno-mir-29b-2
MIR-29
AGCACCA
MIMAT0004717
MIMAT0000801
chr1
38238385
38238449
+
R. norvegicus
Bilateria
No
1
Rno-Mir-29-P1d6-v2
rno-mir-29b-3
MIR-29
UAGCACC
MIMAT0004717
MIMAT0000801
chr1
38238386
38238448
+
R. norvegicus
Bilateria
No
1
Rno-Mir-29-P2b
rno-mir-29a
MIR-29
AGCACCA
MIMAT0004718
MIMAT0000802
chr4
58343944
58344003
-
Gnathostomata
Bilateria
No
1
Rno-Mir-29-P2d5
rno-mir-29c-1
MIR-29
AGCACCA
MIMAT0003154
MIMAT0000803
chr13
113782602
113782659
+
R. norvegicus
Bilateria
No
1
Rno-Mir-29-P2d6
rno-mir-29c-2
MIR-29
AGCACCA
MIMAT0003154
MIMAT0000803
chr1
38238921
38238978
+
R. norvegicus
Bilateria
No
1
Rno-Mir-30-P1a
rno-mir-30d
MIR-30
GUAAACA
MIMAT0000807
MIMAT0004722
chr7
109286472
109286533
-
Gnathostomata
Vertebrata
No
1
Rno-Mir-30-P1b
rno-mir-30a
MIR-30
GUAAACA
MIMAT0000808
MIMAT0000809
chr9
29542640
29542702
+
Gnathostomata
Vertebrata
No
1
1
1
Rno-Mir-30-P1d
rno-mir-30e
MIR-30
GUAAACA
MIMAT0000805
MIMAT0004720
chr5
139702884
139702947
-
Gnathostomata
Vertebrata
No
1
Rno-Mir-30-P2a
rno-mir-30b
MIR-30
GUAAACA
MIMAT0000806
MIMAT0004721
901814657
125
184
-
Gnathostomata
Vertebrata
No
1
Rno-Mir-30-P2b
rno-mir-30c-2
MIR-30
GUAAACA
MIMAT0000804
MIMAT0005442
chr9
29562389
29562450
+
Gnathostomata
Vertebrata
No
1
1
1
Rno-Mir-30-P2d
rno-mir-30c-1
MIR-30
GUAAACA
MIMAT0000804
MIMAT0004719
chr5
139699889
139699949
-
Gnathostomata
Vertebrata
No
1
1
Rno-Mir-31
rno-mir-31a
MIR-31
GGCAAGA
MIMAT0000810
MIMAT0017102
chr5
107206542
107206600
+
Bilateria
Bilateria
No
1
1
Rno-Mir-32
rno-mir-32
MIR-32
AUUGCAC
MIMAT0000811
MIMAT0017103
chr5
73934258
73934319
-
Gnathostomata
Gnathostomata
No
1
1
Rno-Mir-33-P3
rno-mir-33
MIR-33
UGCAUUG
MIMAT0000812
MIMAT0017104
chr7
123431617
123431677
+
Gnathostomata
Bilateria
Yes
1
1
Rno-Mir-34-P1
rno-mir-34a
MIR-34
GGCAGUG
MIMAT0000815
MIMAT0017106
chr5
167092510
167092575
+
Gnathostomata
Bilateria
No
1
1
Rno-Mir-34-P2a
rno-mir-34b
MIR-34
GGCAGUG
MIMAT0000813
MIMAT0017105
chr8
55492554
55492612
-
Gnathostomata
Bilateria
No
1
Rno-Mir-34-P2b
rno-mir-34c
MIR-34
GGCAGUG
MIMAT0000814
MIMAT0004723
chr8
55492034
55492088
-
Gnathostomata
Bilateria
No
1
1
Rno-Mir-34-P3a
rno-mir-449c
MIR-34
GGCAGUG
MIMAT0017803
MIMAT0017804
chr2
44896085
44896147
+
Gnathostomata
Bilateria
Unknown
1
Rno-Mir-34-P3b
None
MIR-34
GGCAGUG
None
None
chr2
44897502
44897562
+
Gnathostomata
Bilateria
Unknown
1
1
Rno-Mir-34-P3c
rno-mir-449a
MIR-34
GGCAGUG
MIMAT0001543
MIMAT0017181
chr2
44897616
44897677
+
Gnathostomata
Bilateria
No
1
1
Rno-Mir-92-P1a
rno-mir-92a-1
MIR-92
AUUGCAC
MIMAT0017107
MIMAT0000816
chr15
100180596
100180654
+
Gnathostomata
Bilateria
No
1
Rno-Mir-92-P1c
rno-mir-92a-2
MIR-92
AUUGCAC
MIMAT0017108
MIMAT0000816
chrX
140117265
140117325
-
Gnathostomata
Bilateria
No
1
Rno-Mir-92-P1d
rno-mir-92b
MIR-92
AUUGCAC
MIMAT0017319
MIMAT0005340
chr2
188541044
188541106
-
Gnathostomata
Bilateria
No
1