MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-149

Family name MIR-149 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-149
Paralogues
Orthologues Bta-Mir-149  Cfa-Mir-149  Cja-Mir-149  Cpo-Mir-149  Dno-Mir-149  Eca-Mir-149  Ete-Mir-149  Hsa-Mir-149  Laf-Mir-149  Mml-Mir-149  Mmr-Mir-149  Mmu-Mir-149  Ocu-Mir-149  Pab-Mir-149 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chr9: 100016455-100016516 [+] UCSC Ensembl
Seed CUGGCUC
Precursor
(pre-Mir +30nt flank)		 
UGCCCGGGGCCCUCAGGCCGGUGCCCGGGCUCUGGCUCCGUGUCUUCACUCCCGUGUUUGUCCGAGGAGGGAGGGAGGGACGGGGGCGGUGCUGGGGCAACUGGAACAGCGCAGGUCGCCGG
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Structure
        10         20         30        40        50        60 
UGCCCGGGGCCCUCAGG-    -|    G   U   G      G     A     GUGUUUG 
                  CCGG UGCCC GGC CUG CUCCGU UCUUC CUCCC       \
                  GGUC ACGGG UCG GGC GGGGCA GGAGG GAGGG       U
GGCCGCUGGACGCGACAA    A^    G   U   G      G     -     AGGAGCC 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
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Mature sequence

Rno-Mir-149_5p
mirBase accessionMIMAT0035726
Sequence 
0- UCUGGCUCCGUGUCUUCACUCCC -23
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Proposed targets TargetScanVert: rno-miR-149-5p
miRDB: MIMAT0035726
Star sequence

Rno-Mir-149_3p*
mirBase accessionMIMAT0035727
Sequence 
40- GAGGGAGGGACGGGGGCGGUGC -62
Get sequence
Proposed targets TargetScanVert: rno-miR-149-3p
miRDB: MIMAT0035727