| MirGeneDB ID | Mml-Mir-149 |
|---|
| Family name |
MIR-149 (all species) |
|---|
| Species |
Rhesus monkey (Macaca mulatta) |
|---|
| MiRBase ID |
mml-mir-149
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-149
Cfa-Mir-149
Cja-Mir-149
Cpo-Mir-149
Dno-Mir-149
Eca-Mir-149
Ete-Mir-149
Hsa-Mir-149
Laf-Mir-149
Mmr-Mir-149
Mmu-Mir-149
Ocu-Mir-149
Pab-Mir-149
Rno-Mir-149
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014347.1: 127823732-127823793 [+]
UCSC
Ensembl
|
|---|
| Seed |
CUGGCUC |
|---|
Precursor
(pre-Mir +30nt flank) |
UGCCCGGGGCUCCCAGGCCGGCGCCCAAGCUCUGGCUCCGUGUCUUCACUCCCGUGUUUGUCCGAGGAGGGAGGGAGGGACGGGGGCUGUGCUGGGGCAGCCGGAACAGCGCAGGUCACCGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UGCCCGGGGCUCCCAGG- -| A UCU - G A GUGUUUG
CCGGC GCCC AGC GGCUCC GU UCUUC CUCCC \
GGCCG CGGG UCG UCGGGG CA GGAGG GAGGG U
GGCCACUGGACGCGACAA A^ G UG- G G - AGGAGCC
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UGUG in loop |
|---|
Tissue expression
|
| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Mml-Mir-149_5p |
| mirBase accession | MIMAT0006210 |
|---|
| Sequence |
0- UCUGGCUCCGUGUCUUCACUCCC -23
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-149-5p
|
|---|
| Star sequence |
Mml-Mir-149_3p* |
| mirBase accession | MIMAT0026827 |
|---|
| Sequence |
40- GAGGGAGGGACGGGGGCUGUGC -62
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-149-3p
|
|---|
