MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-149

Family name MIR-149 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-149
Paralogues
Orthologues Bta-Mir-149  Cja-Mir-149  Cpo-Mir-149  Dno-Mir-149  Eca-Mir-149  Ete-Mir-149  Hsa-Mir-149  Laf-Mir-149  Mml-Mir-149  Mmr-Mir-149  Mmu-Mir-149  Ocu-Mir-149  Pab-Mir-149  Rno-Mir-149 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr25: 50483534-50483593 [+] UCSC Ensembl
Seed CUGGCUC
Precursor
(pre-Mir +30nt flank)		 
CCGCCCGGGGCCUCAGGCCGGCGCCCGGGCUCUGGCUCCGUGUCUUCACUCCCGUGUGUCCGAGGAGGGAGGGAGGGACGGGGGCUGUGCUGGGGCAGCCGGAACAGCGCAGGCCUCCGG
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Structure
        10         20         30         40        50          
CCGCCCGGGGCCUCAGG-     -|   G   UCU      -  G     A     GUGUGU 
                  CCGGC GCCC GGC   GGCUCC GU UCUUC CUCCC      \
                  GGCCG CGGG UCG   UCGGGG CA GGAGG GAGGG      C
GGCCUCCGGACGCGACAA     A^   G   UG-      G  G     -     AGGAGC 
.       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-149_5p
mirBase accessionMIMAT0009884
Sequence 
0- UCUGGCUCCGUGUCUUCACUCCC -23
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Proposed targets TargetScanVert: cfa-miR-149
miRDB: MIMAT0009884
Star sequence

Cfa-Mir-149_3p*
mirBase accessionNone
Sequence 
38- GAGGGAGGGACGGGGGCUGUGC -60
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