| MirGeneDB ID | Rno-Mir-1251 |
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| Family name |
MIR-1251 (all species) |
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| Seed |
CUCUAGC |
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| Species |
Norway rat (Rattus norvegicus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-1251
Cfa-Mir-1251
Cpo-Mir-1251
Dno-Mir-1251
Ete-Mir-1251
Hsa-Mir-1251
Mdo-Mir-1251
Mml-Mir-1251
Mmu-Mir-1251
Ocu-Mir-1251
Sha-Mir-1251
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| Node of Origin (locus) |
Theria
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| Node of Origin (family) |
Theria
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Genome context
(rn6) |
chr7: 32983168-32983226 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUCGCGACCAUCCAUGGGUCAGCUAUGUGGACUCUAGCUGCCAAAGGCGCUUCUCCUUCUGAACAGAGCGCUUUGCUCAGCCAGUGUAGACAUGGCCUGAUAAACAAUGGAACUUCUCC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CUCGCGACCAUCCAUGG- -| GG U A CCA UCUCCUU
GUCA GCUAUGU AC CU GCUG AAGGCGCU \
UAGU CGGUACA UG GA CGAC UUUCGCGA C
CCUCUUCAAGGUAACAAA C^ GA U C UCG GACAAGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | No |
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Tissue expression
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| Ad |
Ad |
Br |
Br |
Br |
Ce |
Ce |
Ce |
Ce |
Co |
Co |
Co |
Co |
Dr |
Dr |
Du |
Du |
Du |
Du |
He |
He |
Hi |
Hi |
Il |
Il |
Je |
Je |
Ki |
Ki |
Ki |
Ki |
Li |
Li |
Li |
Li |
Me |
Me |
Mu |
Mu |
Mu |
Mu |
Mu |
Mu |
Mu |
Mu |
Ov |
Pa |
Pa |
St |
St |
St |
Te |
Ut |
Wh |
Br |
Fa |
He |
Ki |
La |
Li |
Li |
Lu |
Mu |
Pa |
Sk |
Sm |
Sp |
St |
Te |
Th |
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| Mature sequence |
Rno-Mir-1251_5p |
| mirBase accession | None |
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| Sequence |
0- ACUCUAGCUGCCAAAGGCGCU -21
Get sequence
|
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| Star sequence |
Rno-Mir-1251_3p* |
| mirBase accession | None |
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| Sequence |
38- CGCUUUGCUCAGCCAGUGUAG -59
Get sequence
|
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