MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-1251

Family name MIR-1251 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1251  Cfa-Mir-1251  Cja-Mir-1251  Cpo-Mir-1251  Dno-Mir-1251  Eca-Mir-1251  Ete-Mir-1251  Hsa-Mir-1251  Laf-Mir-1251  Mdo-Mir-1251  Mml-Mir-1251  Mmr-Mir-1251  Mmu-Mir-1251  Neu-Mir-1251  Ocu-Mir-1251  Pab-Mir-1251  Sha-Mir-1251 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(rn6)		 chr7: 32983168-32983226 [-] UCSC Ensembl
Seed CUCUAGC
Precursor
(pre-Mir +30nt flank)		 
CUCGCGACCAUCCAUGGGUCAGCUAUGUGGACUCUAGCUGCCAAAGGCGCUUCUCCUUCUGAACAGAGCGCUUUGCUCAGCCAGUGUAGACAUGGCCUGAUAAACAAUGGAACUUCUCC
Get precursor sequence
Structure
        10         20         30        40        50         
CUCGCGACCAUCCAUGG-    -|      GG  U  A    CCA        UCUCCUU 
                  GUCA GCUAUGU  AC CU GCUG   AAGGCGCU       \
                  UAGU CGGUACA  UG GA CGAC   UUUCGCGA       C
CCUCUUCAAGGUAACAAA    C^      GA  U  C    UCG        GACAAGU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
- +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Mature sequence

Rno-Mir-1251_5p
mirBase accessionNone
Sequence 
0- ACUCUAGCUGCCAAAGGCGCU -21
Get sequence
Star sequence

Rno-Mir-1251_3p*
mirBase accessionNone
Sequence 
38- CGCUUUGCUCAGCCAGUGUAG -59
Get sequence