MirGeneDB 3.0
93 microRNA genes with node of origin Theria
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Cfa-Mir-325 cfa-mir-325 MIR-325 UUAUUGA MIMAT0009897 None chrX 59443950 59444009 - Theria Theria No
Eca-Mir-325 None MIR-325 UUAUUGA None None CM009179.1 60292477 60292536 - Theria Theria No
Hsa-Mir-325 hsa-mir-325 MIR-325 UUAUUGA MIMAT0000771 None chrX 77005427 77005486 - Theria Theria Unknown
Laf-Mir-325 None MIR-325 CUAGUAG None None GL010051.1 24640232 24640291 + Theria Theria Unknown
Mdo-Mir-325 mdo-mir-325 MIR-325 UGAUUAA MIMAT0050112 MIMAT0050113 1 273898551 273898610 - Theria Theria No
Mml-Mir-325 mml-mir-325 MIR-325 UUAUUGA MIMAT0006268 None CM014356.1 73683399 73683458 - Theria Theria Unknown 1
Mmr-Mir-325 None MIR-325 CUAGUAG None None CM007693.1 7342116 7342175 - Theria Theria Unknown
Mmu-Mir-325 mmu-mir-325 MIR-325 CUAGUAG MIMAT0000558 MIMAT0004640 chrX 105379105 105379164 - Theria Theria No
Ocu-Mir-325 ocu-mir-325 MIR-325 CUAGUAG MIMAT0048372 MIMAT0048373 chrX 69057718 69057777 - Theria Theria No
Pab-Mir-325 None MIR-325 UUAUUGA None None CM054702.2 81913495 81913554 - Theria Theria Unknown
Rno-Mir-325 rno-mir-325 MIR-325 CUAGUAG MIMAT0000557 MIMAT0004639 chrX 76334294 76334353 - Theria Theria No
Sha-Mir-325 None MIR-325 UGAUUAA None None GL834551.1 1012060 1012119 - Theria Theria No
Cfa-Mir-483 cfa-mir-483 MIR-483 GGACGGG None MIMAT0009901 chr18 46298398 46298459 - Theria Theria No 1
Cja-Mir-483 None MIR-483 AGACGGG None None CM021925.1 126483162 126483224 + Theria Theria No 1 1
Cpo-Mir-483 cpo-mir-483 MIR-483 AGACGGG MIMAT0047273 MIMAT0047274 scaffold_42 12421632 12421692 + Theria Theria No 1 1
Dno-Mir-483 dno-mir-483 MIR-483 ACUCCUC MIMAT0047908 MIMAT0047909 JH581424 30805 30864 + Theria Theria No 1 1
Ete-Mir-483 None MIR-483 GGACGGG None None JH980433 1921138 1921200 - Theria Theria Unknown 1 1
Hsa-Mir-483 hsa-mir-483 MIR-483 AGACGGG MIMAT0004761 MIMAT0002173 chr11 2134140 2134202 - Theria Theria No 1 1
Mml-Mir-483 None MIR-483 AGACGGG None None CM014349.1 2194480 2194542 - Theria Theria No 1 1
Mmr-Mir-483 None MIR-483 AGGCGGG None None CM007665.1 10471986 10472046 - Theria Theria No 1 1
Mmu-Mir-483 mmu-mir-483 MIR-483 AGACGGG MIMAT0004782 MIMAT0003120 chr7 142654930 142654989 - Theria Theria No 1 1
Neu-Mir-483 None MIR-483 ACUCCUC None None CM051814.1 25696316 25696379 + Theria Theria No 1 1
Ocu-Mir-483 None MIR-483 AGACGGG None None 1987813688 50 110 - Theria Theria No 1 1
Pab-Mir-483 None MIR-483 AGACGGG None None CM054688.2 2126903 2126965 - Theria Theria Unknown 1 1
Rno-Mir-483 rno-mir-483 MIR-483 AGACGGG MIMAT0017201 MIMAT0003121 chr1 215832094 215832153 - Theria Theria No 1 1
Sha-Mir-483 None MIR-483 ACUCCUC None None GL865246.1 66231 66294 + Theria Theria No 1
Bta-Mir-483 V bta-mir-483 MIR-483 ACUCCUC None MIMAT0009327 NC_037356.1 49418347 49418407 + Theria Theria 2 No 1 1
Eca-Mir-483 V eca-mir-483 MIR-483 ACUCCUC None MIMAT0034670 CM009159.1 34440828 34440889 - Theria Theria 2 No 1 1
Bta-Mir-671 bta-mir-671 MIR-671 CCGGUUC MIMAT0009365 None NC_037331.1 113815922 113815981 + Theria Theria No
Cfa-Mir-671 cfa-mir-671 MIR-671 CCGGUUC None MIMAT0009926 chr16 15278792 15278851 + Theria Theria No
Cja-Mir-671 None MIR-671 GGAAGCC None None CM021922.1 94286402 94286461 - Theria Theria No
Cpo-Mir-671 cpo-mir-671 MIR-671 CCGGUUC MIMAT0047369 MIMAT0047370 scaffold_32 932637 932696 + Theria Theria No
Dno-Mir-671 dno-mir-671 MIR-671 CCGGUUC MIMAT0047998 MIMAT0047999 JH567928 582468 582527 + Theria Theria No
Eca-Mir-671 eca-mir-671 MIR-671 CCGGUUC MIMAT0012948 MIMAT0012949 CM009151.1 102950780 102950839 + Theria Theria No
Ete-Mir-671 None MIR-671 GGAAGCC None None JH980304 19643906 19643965 + Theria Theria Unknown
Hsa-Mir-671 hsa-mir-671 MIR-671 GGAAGCC MIMAT0003880 MIMAT0004819 chr7 151238449 151238508 + Theria Theria No
Laf-Mir-671 None MIR-671 GGAAGCC None None GL010039.1 59837438 59837497 + Theria Theria Unknown
Mml-Mir-671 mml-mir-671 MIR-671 GGAAGCC MIMAT0006505 MIMAT0006506 CM014338.1 177242677 177242736 + Theria Theria No
Mmr-Mir-671 None MIR-671 CCGGUUC None None CM007671.1 4622061 4622120 - Theria Theria No
Mmu-Mir-671 mmu-mir-671 MIR-671 GGAAGCC MIMAT0003731 MIMAT0004821 chr5 24592132 24592191 + Theria Theria No
Neu-Mir-671 None MIR-671 GGAAGCC None None CM051815.1 94797472 94797531 - Theria Theria Unknown 1
Ocu-Mir-671 ocu-mir-671 MIR-671 CCGGUUC MIMAT0048555 MIMAT0048556 chr13 12646802 12646861 + Theria Theria No
Pab-Mir-671 None MIR-671 GGAAGCC None None CM054685.2 148701299 148701358 + Theria Theria Unknown
Rno-Mir-671 rno-mir-671 MIR-671 CCGGUUC None MIMAT0005326 chr4 7108758 7108817 - Theria Theria No
Sha-Mir-671 None MIR-671 GGAAGCC None None GL861667.1 766514 766573 + Theria Theria Unknown 1
Cfa-Mir-675 None MIR-675 UGUAUGC None None chr18 46206405 46206461 - Theria Theria No 1
Cja-Mir-675 None MIR-675 UGUAUGC None None CM021925.1 126637762 126637818 + Theria Theria Unknown 1
Cpo-Mir-675 cpo-mir-675 MIR-675 UGUAUGC MIMAT0047373 MIMAT0047374 scaffold_42 12522087 12522143 + Theria Theria No 1
Dno-Mir-675 dno-mir-675 MIR-675 UGUAUGC MIMAT0048002 MIMAT0048003 JH567658 65304 65360 - Theria Theria No 1
Eca-Mir-675 eca-mir-675 MIR-675 GGCGCGG MIMAT0013053 None CM009159.1 34335957 34336013 - Theria Theria No 1
Hsa-Mir-675 hsa-mir-675 MIR-675 UGUAUGC MIMAT0004284 MIMAT0006790 chr11 1996766 1996822 - Theria Theria No 1
Laf-Mir-675 None MIR-675 UGUAUGC None None GL010172.1 877710 877766 - Theria Theria Unknown 1
Mml-Mir-675 mml-mir-675 MIR-675 UGUAUGC MIMAT0006507 MIMAT0026908 CM014349.1 2073175 2073231 - Theria Theria No 1
Mmr-Mir-675 None MIR-675 UGUAUGC None None CM007665.1 10358943 10358999 - Theria Theria No 1
Mmu-Mir-675 mmu-mir-675 MIR-675 UGUAUGC MIMAT0003725 MIMAT0003726 chr7 142577078 142577133 - Theria Theria No 1
Neu-Mir-675 None MIR-675 GGAGCGG None None CM051814.1 25820357 25820415 + Theria Theria Yes 1
Pab-Mir-675 None MIR-675 UGUAUGC None None CM054688.2 1985962 1986018 - Theria Theria No 1
Rno-Mir-675 rno-mir-675 MIR-675 UGUAUGC MIMAT0012841 MIMAT0017363 chr1 215745995 215746050 - Theria Theria No 1
Sha-Mir-675 None MIR-675 GGAGCGG None None GL865246.1 162018 162075 + Theria Theria Yes 1
Bta-Mir-1251 bta-mir-1251 MIR-1251 CUCUAGC MIMAT0009963 None NC_037332.1 61701397 61701455 + Theria Theria Unknown
Cfa-Mir-1251 None MIR-1251 CUCUAGC None None chr15 37111042 37111100 + Theria Theria Yes
Cja-Mir-1251 None MIR-1251 CUCUAGC None None CM021923.1 97098465 97098523 + Theria Theria Unknown
Cpo-Mir-1251 cpo-mir-1251 MIR-1251 CUCUAGC MIMAT0047407 MIMAT0047408 scaffold_9 4581323 4581381 - Theria Theria Unknown
Dno-Mir-1251 dno-mir-1251 MIR-1251 CUCUAGC MIMAT0048033 MIMAT0048034 JH569142 1380372 1380430 + Theria Theria Unknown
Eca-Mir-1251 None MIR-1251 CUCUAGC None None CM009175.1 23245501 23245559 + Theria Theria Unknown
Ete-Mir-1251 None MIR-1251 CUCUAGC None None JH980300 30397988 30398046 - Theria Theria Unknown
Hsa-Mir-1251 hsa-mir-1251 MIR-1251 CUCUAGC MIMAT0005903 MIMAT0026741 chr12 97491913 97491971 + Theria Theria Yes
Laf-Mir-1251 None MIR-1251 CUCUAGC None None GL010029.1 92383312 92383370 + Theria Theria Unknown
Mdo-Mir-1251 mdo-mir-1251 MIR-1251 CUCUAGC MIMAT0028700 MIMAT0028701 8 74781632 74781690 + Theria Theria No
Mml-Mir-1251 mml-mir-1251 MIR-1251 CUCUAGC MIMAT0028242 MIMAT0028243 CM014346.1 97299991 97300049 + Theria Theria Yes
Mmr-Mir-1251 None MIR-1251 CUCUAGC None None CM007667.1 25024590 25024648 - Theria Theria Unknown
Mmu-Mir-1251 mmu-mir-1251 MIR-1251 CUCUAGC MIMAT0014824 MIMAT0014825 chr10 92137152 92137210 - Theria Theria Yes
Neu-Mir-1251 None MIR-1251 CUCUAGC None None CM051815.1 280285956 280286014 + Theria Theria Unknown
Ocu-Mir-1251 ocu-mir-1251 MIR-1251 CUCUAGC MIMAT0048587 MIMAT0048588 chr4 76714498 76714556 + Theria Theria Unknown
Pab-Mir-1251 None MIR-1251 CUCUAGC None None CM054689.2 96023777 96023835 + Theria Theria Unknown
Rno-Mir-1251 None MIR-1251 CUCUAGC None None chr7 32983168 32983226 - Theria Theria Unknown
Sha-Mir-1251 None MIR-1251 CUCUAGC None None GL861598.1 2793465 2793523 + Theria Theria Unknown
Bta-Mir-3613 bta-mir-3613a MIR-3613 GUUGUAC MIMAT0024574 None NC_037339.1 19447849 19447907 - Theria Theria No 1
Cfa-Mir-3613 None MIR-3613 GUUGUAC None None VSDE02000093.1 2150431 2150489 + Theria Theria No 1
Cja-Mir-3613 None MIR-3613 GUUGUAC None None CM021915.1 65267668 65267726 + Theria Theria Unknown 1
Cpo-Mir-3613 cpo-mir-3613 MIR-3613 GUUGUAC MIMAT0047439 MIMAT0047440 scaffold_6 59835890 59835947 - Theria Theria No 1
Dno-Mir-3613 dno-mir-3613 MIR-3613 GUUGUAC MIMAT0048063 MIMAT0048064 JH570793 688270 688328 - Theria Theria No 1
Eca-Mir-3613 eca-mir-3613 MIR-3613 GUUGUAC None MIMAT0034742 CM009164.1 21087975 21088033 + Theria Theria No 1
Ete-Mir-3613 None MIR-3613 GUUGUAC None None JH980311 7380992 7381049 + Theria Theria No 1
Hsa-Mir-3613 hsa-mir-3613 MIR-3613 GUUGUAC MIMAT0017990 MIMAT0017991 chr13 49996428 49996486 - Theria Theria No 1
Laf-Mir-3613 None MIR-3613 CAAAAAA None None GL010050.1 31596801 31596859 - Theria Theria No 1
Mdo-Mir-3613 None MIR-3613 GUUGUAC None None 4 318254539 318254596 + Theria Theria No 1
Mml-Mir-3613 None MIR-3613 GUUGUAC None None CM014352.1 28449352 28449410 - Theria Theria No 1
Mmr-Mir-3613 None MIR-3613 GUUGUAC None None CM007673.1 64089483 64089541 + Theria Theria No 1
Neu-Mir-3613 None MIR-3613 GUUGUAC None None CM051817.1 106341777 106341835 + Theria Theria No 1
Ocu-Mir-3613 ocu-mir-3613 MIR-3613 GUUGUAC MIMAT0048611 MIMAT0048612 chrUn0007 3616992 3617050 - Theria Theria No 1
Pab-Mir-3613 None MIR-3613 GUUGUAC None None CM054693.2 54978913 54978971 - Theria Theria No 1
Sha-Mir-3613 None MIR-3613 GUUGUAC None None GL856059.1 1819 1877 - Theria Theria No 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all