| MirGeneDB ID | Pab-Mir-325 |
|---|
| Family name |
MIR-325 (all species) |
|---|
| Species |
Sumatran orangutan (Pongo abelii) |
|---|
| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Cfa-Mir-325
Eca-Mir-325
Hsa-Mir-325
Laf-Mir-325
Mdo-Mir-325
Mml-Mir-325
Mmr-Mir-325
Mmu-Mir-325
Ocu-Mir-325
Rno-Mir-325
Sha-Mir-325
|
|---|
| Node of Origin (locus) |
Theria
|
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| Node of Origin (family) |
Theria
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 81913495-81913554 [-]
UCSC
Ensembl
|
|---|
| Seed |
UUAUUGA |
|---|
Precursor
(pre-Mir +30nt flank) |
AAGUCCACAGAACCAAUACAGUGCUUGGUUCCUAGUAGGUGUCCAGUAAGUGUUUGUGACGUAAUUUGCUUAUUGAGGACCUCCUAUCAAUCAAGCACUGUGCUAGGCUCUGGGACUACA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAGUCCACAGAACCAAU--| CC U G - UUUGUG
ACAGUGCUUGGUU UAG AGGU UC CAGUAAGUG A
UGUCACGAACUAA AUC UCCA GG GUUAUUCGU C
ACAUCAGGGUCUCGGAUCG^ CU C - A UUAAUG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
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| Star sequence |
Pab-Mir-325_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CCUAGUAGGUGUCCAGUAAGUG -22
Get sequence
|
|---|
| Mature sequence |
Pab-Mir-325_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
38- CUUAUUGAGGACCUCCUAUCAA -60
Get sequence
|
|---|
