MirGeneDB 2.1

MirGeneDB ID

Ocu-Mir-325

Family name MIR-325 (all species)
Seed CUAGUAG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-325
Paralogues
Orthologues Cfa-Mir-325  Hsa-Mir-325  Mdo-Mir-325  Mml-Mir-325  Mmu-Mir-325  Rno-Mir-325  Sha-Mir-325 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(oryCun2_add)
chrX: 69057718-69057777 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-325)
Mir-384 chrX: 69021490-69021552 [-] UCSC Ensembl
Mir-325 chrX: 69057718-69057777 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUCUAACAGAGCCGAUACAGUGCUUGGUUCCUAGUAGGUGUUCAGUAAGUGUUUGUGACAUAAUUCGUUUAUUGAGCACCUCCUAUCAAUCAAGCACUGUGCUAGGCUCUGGGACCACG
Get precursor sequence
Structure
        10          20        30        40        50         
AUUCUAACAGAGCCGAU--|            CC   U                UUUGUG 
                   ACAGUGCUUGGUU  UAG AGGUGUUCAGUAAGUG      A
                   UGUCACGAACUAA  AUC UCCACGAGUUAUUUGC      C
GCACCAGGGUCUCGGAUCG^            CU   C                UUAAUA 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-325_5p

mirBase accessionMIMAT0048372
Sequence
0- CCUAGUAGGUGUUCAGUAAGUG -22
Get sequence
Co-mature sequence

Ocu-Mir-325_3p

mirBase accessionMIMAT0048373
Sequence
38- UUUAUUGAGCACCUCCUAUCAA -60
Get sequence