MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-671

Family name MIR-671 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-671
Paralogues
Orthologues Cfa-Mir-671  Cja-Mir-671  Cpo-Mir-671  Dno-Mir-671  Eca-Mir-671  Ete-Mir-671  Hsa-Mir-671  Laf-Mir-671  Mml-Mir-671  Mmr-Mir-671  Mmu-Mir-671  Neu-Mir-671  Ocu-Mir-671  Pab-Mir-671  Rno-Mir-671  Sha-Mir-671 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037331.1: 113815922-113815981 [+] UCSC Ensembl
Seed CCGGUUC
Precursor
(pre-Mir +30nt flank)
UGGCCGCCGACCUGGCAGGCCAGGAAGAGGAGGAAGCCCUGGAGGGGCUGGAGGUGAUGGAUGUUUUCCUCCGGUUCUCAGGGCUCCACCUUUUCCGGGCCGUGGAGCCAGGGCUGGUGC
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Structure
        10          20        30        40        50        60 
UGGCCGCCGACCUGGCA--|   A        A   A      GA           UGAUGG 
                   GGCC GGAAGAGG GGA GCCCUG  GGGGCUGGAGG      \
                   CCGG CCUUUUCC CCU CGGGAC  UCUUGGCCUCC      A
CGUGGUCGGGACCGAGGUG^   G        A   -      --           UUUUGU 
.       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-671_5p*

mirBase accessionMIMAT0009365
Sequence
0- AGGAAGCCCUGGAGGGGCUGGAGG -24
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Proposed targets TargetScanVert: bta-miR-671
Mature sequence

Bta-Mir-671_3p

mirBase accessionNone
Sequence
39- UCCGGUUCUCAGGGCUCCACC -60
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