MirGeneDB ID | Neu-Mir-671 |
Family name |
MIR-671 (all species) |
Species |
Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID |
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Paralogues |
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Orthologues |
Bta-Mir-671
Cfa-Mir-671
Cja-Mir-671
Cpo-Mir-671
Dno-Mir-671
Eca-Mir-671
Ete-Mir-671
Hsa-Mir-671
Laf-Mir-671
Mml-Mir-671
Mmr-Mir-671
Mmu-Mir-671
Ocu-Mir-671
Pab-Mir-671
Rno-Mir-671
Sha-Mir-671
|
Node of Origin (locus) |
Theria
|
Node of Origin (family) |
Theria
|
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051815.1: 94797472-94797531 [-]
UCSC
Ensembl
|
Seed |
GGAAGCC |
Precursor (pre-Mir +30nt flank) |
UGGCCGGGGAACUGGCUGGACAGGAAGAAGAGGAAGCCCUUGAGGGGCUAGAGGUGCUAGAUGUUUUUCUACGCUUCUCUGGACUGCACCUUUUUCGUGCAGUUGAGCCAGGCCUGGUGC
Get precursor sequence
|
Structure | 10 20 30 40 50
UGGCCGGGGAACUGGCUGGA-| G AGGA C UU - UGCUA
CA GAAGAAG AG CC GAGGGGC UAGAGG \
GU CUUUUUC UC GG CUCUUCG AUCUUU G
CGUGGUCCGGACCGAGUUGAC^ G CACG A U- C UUGUA
. 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | UG at 5p(-14) |
Tissue expression
|
Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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Mature sequence |
Neu-Mir-671_5p (predicted) |
mirBase accession | None |
Sequence |
0- AGGAAGCCCUUGAGGGGCUAGAGG -24
Get sequence
|
Co-mature sequence |
Neu-Mir-671_3p (predicted) |
mirBase accession | None |
Sequence |
36- UUCUACGCUUCUCUGGACUGCACC -60
Get sequence
|