MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-671

Family name MIR-671 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-671  Cfa-Mir-671  Cja-Mir-671  Cpo-Mir-671  Dno-Mir-671  Eca-Mir-671  Ete-Mir-671  Hsa-Mir-671  Laf-Mir-671  Mml-Mir-671  Mmr-Mir-671  Mmu-Mir-671  Ocu-Mir-671  Pab-Mir-671  Rno-Mir-671  Sha-Mir-671 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051815.1: 94797472-94797531 [-] UCSC Ensembl
Seed GGAAGCC
Precursor
(pre-Mir +30nt flank)
UGGCCGGGGAACUGGCUGGACAGGAAGAAGAGGAAGCCCUUGAGGGGCUAGAGGUGCUAGAUGUUUUUCUACGCUUCUCUGGACUGCACCUUUUUCGUGCAGUUGAGCCAGGCCUGGUGC
Get precursor sequence
Structure
        10        20         30        40         50          
UGGCCGGGGAACUGGCUGGA-| G       AGGA  C  UU       -      UGCUA 
                     CA GAAGAAG    AG CC  GAGGGGC UAGAGG     \
                     GU CUUUUUC    UC GG  CUCUUCG AUCUUU     G
CGUGGUCCGGACCGAGUUGAC^ G       CACG  A  U-       C      UUGUA 
.       110       100        90        80         70
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-671_5p (predicted)

mirBase accessionNone
Sequence
0- AGGAAGCCCUUGAGGGGCUAGAGG -24
Get sequence
Co-mature sequence

Neu-Mir-671_3p (predicted)

mirBase accessionNone
Sequence
36- UUCUACGCUUCUCUGGACUGCACC -60
Get sequence