MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-671

Family name MIR-671 (all species)
Seed GGAAGCC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-671
Paralogues
Orthologues Bta-Mir-671  Cfa-Mir-671  Cpo-Mir-671  Dno-Mir-671  Ete-Mir-671  Hsa-Mir-671  Mml-Mir-671  Ocu-Mir-671  Rno-Mir-671  Sha-Mir-671 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(mm10)
chr5: 24592132-24592191 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGCUGGCGAACUGGCAGGCCAGGAAGAGGAGGAAGCCCUGGAGGGGCUGGAGGUGAUGGAUGUUUUCCUCCGGUUCUCAGGGCUCCACCUCUUUCGAGCCGUAGAGCCAGGGCUGGUGC
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Structure
        10          20        30        40        50        60 
UGGCUGGCGAACUGGCA--|  CA        A   A      GA           UGAUGG 
                   GGC  GGAAGAGG GGA GCCCUG  GGGGCUGGAGG      \
                   CCG  CUUUCUCC CCU CGGGAC  UCUUGGCCUCC      A
CGUGGUCGGGACCGAGAUG^  AG        A   -      --           UUUUGU 
.       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Mature sequence

Mmu-Mir-671_5p

mirBase accessionMIMAT0003731
Sequence
0- AGGAAGCCCUGGAGGGGCUGGAGG -24
Get sequence
Proposed targets microrna.org: MIMAT0003731
TargetScanVert: mmu-miR-671-5p
miRDB: MIMAT0003731
Star sequence

Mmu-Mir-671_3p*

mirBase accessionMIMAT0004821
Sequence
39- UCCGGUUCUCAGGGCUCCACC -60
Get sequence
Proposed targets microrna.org: MIMAT0004821
TargetScanVert: mmu-miR-671-3p
miRDB: MIMAT0004821