MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-671

Family name MIR-671 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-671  Cfa-Mir-671  Cpo-Mir-671  Dno-Mir-671  Eca-Mir-671  Ete-Mir-671  Hsa-Mir-671  Laf-Mir-671  Mml-Mir-671  Mmr-Mir-671  Mmu-Mir-671  Neu-Mir-671  Ocu-Mir-671  Pab-Mir-671  Rno-Mir-671  Sha-Mir-671 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021922.1: 94286402-94286461 [-] UCSC Ensembl
Seed GGAAGCC
Precursor
(pre-Mir +30nt flank)		 
UGGCAGGUGAACUGGCAGGCCAGGAAGAGGAGGAAGCCCUGGAGGGGCUGGAGGUGAUGGAUGUUUUCCUCCGGUUCUCAGGGCUCCACCUCUUUCGAGCCGUAGAGCCAGGGCUGGUGC
Get precursor sequence
Structure
        10          20        30        40        50        60 
UGGCAGGUGAACUGGCA--|  CA        A   A      GA           UGAUGG 
                   GGC  GGAAGAGG GGA GCCCUG  GGGGCUGGAGG      \
                   CCG  CUUUCUCC CCU CGGGAC  UCUUGGCCUCC      A
CGUGGUCGGGACCGAGAUG^  AG        A   -      --           UUUUGU 
.       110       100        90         80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
To
Mature sequence

Cja-Mir-671_5p
mirBase accessionNone
Sequence 
0- AGGAAGCCCUGGAGGGGCUGGAGG -24
Get sequence
Co-mature sequence

Cja-Mir-671_3p
mirBase accessionNone
Sequence 
39- UCCGGUUCUCAGGGCUCCACC -60
Get sequence