| MirGeneDB ID | Eca-Mir-675 |
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| Family name |
MIR-675 (all species) |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-675
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| Paralogues |
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| Orthologues |
Cfa-Mir-675
Cja-Mir-675
Cpo-Mir-675
Dno-Mir-675
Hsa-Mir-675
Laf-Mir-675
Mml-Mir-675
Mmr-Mir-675
Mmu-Mir-675
Neu-Mir-675
Pab-Mir-675
Rno-Mir-675
Sha-Mir-675
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| Node of Origin (locus) |
Theria
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| Node of Origin (family) |
Theria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009159.1: 34335957-34336013 [-]
UCSC
Ensembl
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| Seed |
GGCGCGG |
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Precursor
(pre-Mir +30nt flank) |
CGUUCCCACGCGGCACUGCGGCCCAGGGGCUGGCGCGGAGAGGGCCCACAGUGCACUCAGUGACACUGUAUGCCUUCACCGCUCAGCCCCUGGGACUGGCACGGCAGACAGGACAGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CGUUCCCACGCGGCACUG- -| C A CC CACU
CGG CCCAGGGGCUGG GCGG GAGGGC ACAGUG C
GUC GGGUCCCCGACU CGCC CUUCCG UGUCAC A
CGACAGGACAGACGGCACG A^ - A UA AGUG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Mature sequence |
Eca-Mir-675_5p |
| mirBase accession | MIMAT0013053 |
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| Sequence |
0- UGGCGCGGAGAGGGCCCACAGUG -23
Get sequence
|
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| Star sequence |
Eca-Mir-675_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- CUGUAUGCCUUCACCGCUCAGC -57
Get sequence
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