MirGeneDB ID | Neu-Mir-3613 |
Family name |
MIR-3613 (all species) |
Species |
Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID |
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Paralogues |
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Orthologues |
Bta-Mir-3613
Cfa-Mir-3613
Cja-Mir-3613
Cpo-Mir-3613
Dno-Mir-3613
Eca-Mir-3613
Ete-Mir-3613
Hsa-Mir-3613
Laf-Mir-3613
Mdo-Mir-3613
Mml-Mir-3613
Mmr-Mir-3613
Ocu-Mir-3613
Pab-Mir-3613
Sha-Mir-3613
|
Node of Origin (locus) |
Theria
|
Node of Origin (family) |
Theria
|
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051817.1: 106341777-106341835 [+]
UCSC
Ensembl
|
Seed |
GUUGUAC |
Precursor (pre-Mir +30nt flank) |
ACGACGGCUCCGAGACGGUCGGGUUUGGAUUGUUGUACUUUUUUUUUUGUUCGUUUUAUUUUUAGGAACAAAAAAAAAAGCCCAACCCUUCACGCCGCUUCCCCCGCAUCUCUCCAGAC
Get precursor sequence
|
Structure | 10 20 30 40 50
ACGACGGCUCCGAGACGGUCG--| U UU UA GUUUUA
GGU UGGA GUUG CUUUUUUUUUUGUUC \
CCG ACUU CAAC GAAAAAAAAAACAAG U
CAGACCUCUCUACGCCCCCUUCG^ C CC CC GAUUUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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Mature sequence |
Neu-Mir-3613_5p |
mirBase accession | None |
Sequence |
0- UGUUGUACUUUUUUUUUUGUUC -22
Get sequence
|
Co-mature sequence |
Neu-Mir-3613_3p |
mirBase accession | None |
Sequence |
37- ACAAAAAAAAAAGCCCAACCCU -59
Get sequence
|