Mir-3613

MirGeneDB ID

Cfa-Mir-3613

Family name

MIR-3613 (all species)

Species

Dog (Canis familiaris)

MiRBase ID

Paralogues

Orthologues

Bta-Mir-3613 Cja-Mir-3613 Cpo-Mir-3613 Dno-Mir-3613 Eca-Mir-3613 Ete-Mir-3613 Hsa-Mir-3613 Laf-Mir-3613 Mdo-Mir-3613 Mml-Mir-3613 Mmr-Mir-3613 Neu-Mir-3613 Ocu-Mir-3613 Pab-Mir-3613 Sha-Mir-3613

Node of Origin (locus)

Theria

Node of Origin (family)

Theria

Genome context
(canFam3_add)

VSDE02000093.1: 2150431-2150489 [+] UCSC Ensembl

Seed

GUUGUAC

Precursor
(pre-Mir +30nt flank)

GCUGGCGCCACAAGACGGUUGGGUUUGGAUUGUUGUACUUUUUUUUUUGUUCGUUGCAUUUUCAGGAACAAAAAAAAAAGCCCAACCCUUCACACCGCUUCACGUGCAUCUCUGCGGAC

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Structure

        10        20          30        40        50         
GCUGGCGCCACAAGACGGUUG--|  U    UU    UA               GUUGCA 
                       GGU UGGA  GUUG  CUUUUUUUUUUGUUC      \
                       CCA ACUU  CAAC  GAAAAAAAAAACAAG      U
CAGGCGUCUCUACGUGCACUUCG^  C    CC    CC               GACUUU 
       110       100        90        80        70        60

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

An	An	An	Bl	Ce	Co	He	Hi	Hi	Hy	Ki	Ki	Li	Lu	Ov	Sk	Te	Te

Mature sequence

Cfa-Mir-3613_5p

mirBase accession

None

Sequence

0- UGUUGUACUUUUUUUUUUGUUC -22

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Star sequence

Cfa-Mir-3613_3p*

mirBase accession

None

Sequence

37- ACAAAAAAAAAAGCCCAACCCU -59

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