MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-3613

Family name MIR-3613 (all species)
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-3613  Cfa-Mir-3613  Cja-Mir-3613  Cpo-Mir-3613  Dno-Mir-3613  Eca-Mir-3613  Ete-Mir-3613  Hsa-Mir-3613  Mdo-Mir-3613  Mml-Mir-3613  Mmr-Mir-3613  Neu-Mir-3613  Ocu-Mir-3613  Pab-Mir-3613  Sha-Mir-3613 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010050.1: 31596801-31596859 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-3613)		 Mir-3613 GL010050.1: 31596801-31596859 [-] UCSC Ensembl
Mir-15-P2a GL010050.1: 31640465-31640529 [-] UCSC Ensembl
Mir-15-P1a GL010050.1: 31640611-31640670 [-] UCSC Ensembl
Seed CAAAAAA
Precursor
(pre-Mir +30nt flank)		 
CGACGCGCAAUGAGAUAGUUGGGUUUGGAUUGUUGUACUUUUUUUUUUGUUCGUUUAAUUUUUAGGAACAAAAAAAAAAGCCCAACCCUUCACACCACUUCAUCUGCAUCUCUCAGGAC
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Structure
        10        20          30        40        50         
CGACGCGCAAUGAGAUAGUUG--|  U    UU    UA               GUUUAA 
                       GGU UGGA  GUUG  CUUUUUUUUUUGUUC      \
                       CCA ACUU  CAAC  GAAAAAAAAAACAAG      U
CAGGACUCUCUACGUCUACUUCA^  C    CC    CC               GAUUUU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Wh
Star sequence

Laf-Mir-3613_5p*
mirBase accessionNone
Sequence 
0- UGUUGUACUUUUUUUUUUGUUC -22
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Mature sequence

Laf-Mir-3613_3p
mirBase accessionNone
Sequence 
37- ACAAAAAAAAAAGCCCAACCCU -59
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