| MirGeneDB ID | Sha-Mir-483 |
|---|
| Family name |
MIR-483 (all species) |
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| Seed |
ACUCCUC |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-483-v1
Bta-Mir-483-v2
Cfa-Mir-483
Cpo-Mir-483
Dno-Mir-483
Ete-Mir-483
Hsa-Mir-483
Mml-Mir-483
Mmu-Mir-483
Ocu-Mir-483
Rno-Mir-483
|
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| Node of Origin (locus) |
Theria
|
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| Node of Origin (family) |
Theria
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Genome context
(DEVIL_add) |
GL865246.1: 66231-66294 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAGGAGCCGGGACCCACGAGGGGGAGGGAGAGGAUGGGGGGAGAGAUGGAUUGGGGAUUGUUUAAGGCGACUCACUCCUCCCCUCCCGUCUUCUUCCUCGCCCUCCUUGCCGGCCGCCCCCGGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAGGAGCCGGGACCCAC-- G A AUG-| UUGGGGAUUG
GAGGG GAGGGAGAGGAUGGGGGG GAG GA \
CUCCC CUCCUUCUUCUGCCCUCC CUC CU U
GGGCCCCCGCCGGCCGUUC G C CUCA^ CAGCGGAAUU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Star sequence |
Sha-Mir-483_5p* |
| mirBase accession | None |
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| Sequence |
0- AGGAUGGGGGGAGAGAUGGAUU -22
Get sequence
|
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| Mature sequence |
Sha-Mir-483_3p |
| mirBase accession | None |
|---|
| Sequence |
42- CACUCCUCCCCUCCCGUCUUCU -64
Get sequence
|
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