MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-483

Family name MIR-483 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-483-v1  Cfa-Mir-483  Cja-Mir-483  Cpo-Mir-483  Dno-Mir-483  Eca-Mir-483-v1  Ete-Mir-483  Hsa-Mir-483  Mml-Mir-483  Mmr-Mir-483  Mmu-Mir-483  Ocu-Mir-483  Pab-Mir-483  Rno-Mir-483  Sha-Mir-483 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051814.1: 25696316-25696379 [+] UCSC Ensembl
Seed ACUCCUC
Precursor
(pre-Mir +30nt flank)
UUAGCUCCCUGAACGAUGAGGGUGAGGGAGAGGAUGGGGGGAGAGAUGGAUUGGGGCUAGUUUAAGGCGACUCACUCCUCCCCUCCCGUCUUCUUCCUGACCCUCCUUCACAACACCCCAUCAG
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Structure
        10          20        30        40         50        60 
UUAGCUCCCUGAACGAU--      G                 A   AUG-| UUGGGGCUAG 
                   GAGGGU AGGGAGAGGAUGGGGGG GAG    GA          \
                   CUCCCA UCCUUCUUCUGCCCUCC CUC    CU          U
GACUACCCCACAACACUUC      G                 C   CUCA^ CAGCGGAAUU 
  120       110       100        90        80        70
Deep sequencing
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Star sequence

Neu-Mir-483_5p* (predicted)

mirBase accessionNone
Sequence
0- AGGAUGGGGGGAGAGAUGGAUU -22
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Mature sequence

Neu-Mir-483_3p (predicted)

mirBase accessionNone
Sequence
42- CACUCCUCCCCUCCCGUCUUCU -64
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