MirGeneDB ID | Neu-Mir-483 |
Family name |
MIR-483 (all species) |
Species |
Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-483-v1
Cfa-Mir-483
Cja-Mir-483
Cpo-Mir-483
Dno-Mir-483
Eca-Mir-483-v1
Ete-Mir-483
Hsa-Mir-483
Mml-Mir-483
Mmr-Mir-483
Mmu-Mir-483
Ocu-Mir-483
Pab-Mir-483
Rno-Mir-483
Sha-Mir-483
|
Node of Origin (locus) |
Theria
|
Node of Origin (family) |
Theria
|
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051814.1: 25696316-25696379 [+]
UCSC
Ensembl
|
Seed |
ACUCCUC |
Precursor (pre-Mir +30nt flank) |
UUAGCUCCCUGAACGAUGAGGGUGAGGGAGAGGAUGGGGGGAGAGAUGGAUUGGGGCUAGUUUAAGGCGACUCACUCCUCCCCUCCCGUCUUCUUCCUGACCCUCCUUCACAACACCCCAUCAG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUAGCUCCCUGAACGAU-- G A AUG-| UUGGGGCUAG
GAGGGU AGGGAGAGGAUGGGGGG GAG GA \
CUCCCA UCCUUCUUCUGCCCUCC CUC CU U
GACUACCCCACAACACUUC G C CUCA^ CAGCGGAAUU
120 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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Star sequence |
Neu-Mir-483_5p* (predicted) |
mirBase accession | None |
Sequence |
0- AGGAUGGGGGGAGAGAUGGAUU -22
Get sequence
|
Mature sequence |
Neu-Mir-483_3p (predicted) |
mirBase accession | None |
Sequence |
42- CACUCCUCCCCUCCCGUCUUCU -64
Get sequence
|