MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-483

Family name MIR-483 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-483
Paralogues
Orthologues Cfa-Mir-483  Cja-Mir-483  Cpo-Mir-483  Dno-Mir-483  Eca-Mir-483-v1  Ete-Mir-483  Hsa-Mir-483  Mml-Mir-483  Mmr-Mir-483  Mmu-Mir-483  Neu-Mir-483  Ocu-Mir-483  Pab-Mir-483  Rno-Mir-483  Sha-Mir-483 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037356.1: 49418347-49418407 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-483-v1)		 Mir-483-v1 NC_037356.1: 49418347-49418407 [+] UCSC Ensembl
Mir-483-v2 NC_037356.1: 49418347-49418407 [+] UCSC Ensembl
Variant

Bta-Mir-483-v1
Seed ACUCCUC
Precursor
(pre-Mir +30nt flank)		 
CGAGUCUGGAGCCUGCGGUGGGGGGAGGGGAGGGCGGGAAGAAAGGAGGGCGUGGUCUGUGCAGCUCCUCACUCCUCUCCUCCCGUCUUCUCCUUCUUCCUCCCAUUCCUGCCGGUCUCAG
Get precursor sequence
Structure
        10          20        30        40         50         
CGAGUCUGGAGCCUGCGGU--                    A  A     -| CGUGGUCU 
                     GGGGGGAGGGGAGGGCGGGA GA AGGAG GG        G
                     CCUUCUUCCUCUUCUGCCCU CU UCCUC CU        U
GACUCUGGCCGUCCUUACCCU                    C  C     A^ CCUCGACG 
 .       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-483-v1_5p*
mirBase accessionNone
Sequence 
0- AGGGCGGGAAGAAAGGAGGGC -21
Get sequence
Mature sequence

Bta-Mir-483-v1_3p
mirBase accessionMIMAT0009327
Sequence 
39- CACUCCUCUCCUCCCGUCUUCU -61
Get sequence
Proposed targets TargetScanVert: bta-miR-483
Variant

Bta-Mir-483-v2
Seed CACUCCU
Precursor
(pre-Mir +30nt flank)		 
CGAGUCUGGAGCCUGCGGUGGGGGGAGGGGAGGGCGGGAAGAAAGGAGGGCGUGGUCUGUGCAGCUCCUCACUCCUCUCCUCCCGUCUUCUCCUUCUUCCUCCCAUUCCUGCCGGUCUCAG
Get precursor sequence
Structure
        10          20        30        40         50         
CGAGUCUGGAGCCUGCGGU--                    A  A     -| CGUGGUCU 
                     GGGGGGAGGGGAGGGCGGGA GA AGGAG GG        G
                     CCUUCUUCCUCUUCUGCCCU CU UCCUC CU        U
GACUCUGGCCGUCCUUACCCU                    C  C     A^ CCUCGACG 
 .       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-483-v2_5p*
mirBase accessionNone
Sequence 
0- AGGGCGGGAAGAAAGGAGGGCG -22
Get sequence
Mature sequence

Bta-Mir-483-v2_3p
mirBase accessionMIMAT0009327
Sequence 
38- UCACUCCUCUCCUCCCGUCUUCU -61
Get sequence
Proposed targets TargetScanVert: bta-miR-483