MirGeneDB 3.0

MirGeneDB ID

Mdo-Mir-1251

Family name MIR-1251 (all species)
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-1251
Paralogues
Orthologues Bta-Mir-1251  Cfa-Mir-1251  Cja-Mir-1251  Cpo-Mir-1251  Dno-Mir-1251  Eca-Mir-1251  Ete-Mir-1251  Hsa-Mir-1251  Laf-Mir-1251  Mml-Mir-1251  Mmr-Mir-1251  Mmu-Mir-1251  Neu-Mir-1251  Ocu-Mir-1251  Pab-Mir-1251  Rno-Mir-1251  Sha-Mir-1251 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(monDom5_add)
8: 74781632-74781690 [+] UCSC Ensembl
Seed CUCUAGC
Precursor
(pre-Mir +30nt flank)
CUUCCCUCCCCCAACAGAUCAGCUAUGUAGACUCUAGCUGACUAAGGCGCUUCUCUUUCUAAAAAGAGCGCUUUACUUAGCCAGUGUAGACAUGGCCUGGUAAAUAUUGGAACCACUUC
Get precursor sequence
Structure
        10         20         30        40        50         
CUUCCCUCCCCCAACAG-    -|      AG  U  A     C         UCUCUUU 
                  AUCA GCUAUGU  AC CU GCUGA UAAGGCGCU       \
                  UGGU CGGUACA  UG GA CGAUU AUUUCGCGA       C
CUUCACCAAGGUUAUAAA    C^      GA  U  C     C         GAAAAAU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-1251_5p

mirBase accessionMIMAT0028700
Sequence
0- ACUCUAGCUGACUAAGGCGCU -21
Get sequence
Proposed targets TargetScanVert: mdo-miR-1251-5p
Star sequence

Mdo-Mir-1251_3p*

mirBase accessionMIMAT0028701
Sequence
38- CGCUUUACUUAGCCAGUGUAG -59
Get sequence
Proposed targets TargetScanVert: mdo-miR-1251-3p