MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-551-P2

Family name MIR-551 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-551b
Paralogues
Orthologues Aca-Mir-551-P2  Ami-Mir-551-P2  Bta-Mir-551-P2  Cfa-Mir-551-P2  Cja-Mir-551-P2  Cli-Mir-551-P2  Cmi-Mir-551-P2  Cpi-Mir-551-P2  Cpo-Mir-551-P2  Dno-Mir-551-P2  Dre-Mir-551-P2  Eca-Mir-551-P2  Ete-Mir-551-P2  Gga-Mir-551-P2  Gja-Mir-551-P2  Gmo-Mir-551-P2  Hsa-Mir-551-P2  Laf-Mir-551-P2  Lch-Mir-551-P2  Loc-Mir-551-P2  Mal-Mir-551-P2  Mdo-Mir-551-P2  Mml-Mir-551-P2  Mmr-Mir-551-P2  Mmu-Mir-551-P2  Mun-Mir-551-P2  Neu-Mir-551-P2  Oan-Mir-551-P2  Ocu-Mir-551-P2  Pab-Mir-551-P2  Pbv-Mir-551-P2  Sha-Mir-551-P2  Spt-Mir-551-P2  Sto-Mir-551-P2  Tgu-Mir-551-P2  Xla-Mir-551-P2a  Xla-Mir-551-P2b  Xtr-Mir-551-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(rn6)		 chr2: 116867664-116867723 [+] UCSC Ensembl
Seed CGACCCA
Precursor
(pre-Mir +30nt flank)		 
UAGCCUCCCAGAUGUGCUCUUGUGGCCCAUGAAAUCAAGCUUGGGUGAGACCUGGUACAGAACAGGAAGGCGACCCAUACUUGGUUUCAGUGGCUGCAAGAAUGGCUCUAUUGUCAACGG
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Structure
        10          20        30        40        50        60
UAGCCUCCCAGAUGUGC--|    UG   CA          CU     GAGA   GGUACA 
                   UCUUG  GCC  UGAAAUCAAG  UGGGU    CCU      G
                   AGAAC  CGG  ACUUUGGUUC  ACCCA    GGA      A
GGCAACUGUUAUCUCGGUA^    GU   UG          AU     GC--   AGGACA 
.       110       100        90        80          70
Deep sequencing
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CommentThis gene is a conserved Group 2 miRNA across vertebrates but in the murid rodents the U is templated. Nonetheless it is still classified as a Group 2 miRNA.
3' NTU Yes
MotifsNo
Tissue expression
- +
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Star sequence

Rno-Mir-551-P2_5p*
mirBase accessionMIMAT0017335
Sequence 
0- GAAAUCAAGCUUGGGUGAGACCU -23
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Proposed targets TargetScanVert: rno-miR-551b-5p
miRDB: MIMAT0017335
Mature sequence

Rno-Mir-551-P2_3p
mirBase accessionMIMAT0005596
Sequence 
39- GCGACCCAUACUUGGUUUCAG -60
Get sequence
Proposed targets microrna.org: MIMAT0005596
TargetScanVert: rno-miR-551b-3p
miRDB: MIMAT0005596