MirGeneDB 3.0
MirGeneDB ID

Oan-Mir-551-P2

Family name MIR-551 (all species)
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-551
Paralogues
Orthologues Aca-Mir-551-P2  Ami-Mir-551-P2  Bta-Mir-551-P2  Cfa-Mir-551-P2  Cja-Mir-551-P2  Cli-Mir-551-P2  Cmi-Mir-551-P2  Cpi-Mir-551-P2  Cpo-Mir-551-P2  Dno-Mir-551-P2  Dre-Mir-551-P2  Eca-Mir-551-P2  Ete-Mir-551-P2  Gga-Mir-551-P2  Gja-Mir-551-P2  Gmo-Mir-551-P2  Hsa-Mir-551-P2  Laf-Mir-551-P2  Lch-Mir-551-P2  Loc-Mir-551-P2  Mal-Mir-551-P2  Mdo-Mir-551-P2  Mml-Mir-551-P2  Mmr-Mir-551-P2  Mmu-Mir-551-P2  Mun-Mir-551-P2  Neu-Mir-551-P2  Ocu-Mir-551-P2  Pab-Mir-551-P2  Pbv-Mir-551-P2  Rno-Mir-551-P2  Sha-Mir-551-P2  Spt-Mir-551-P2  Sto-Mir-551-P2  Tgu-Mir-551-P2  Xla-Mir-551-P2a  Xla-Mir-551-P2b  Xtr-Mir-551-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041728.1: 162109414-162109473 [+]
Seed CGACCCA
Precursor
(pre-Mir +30nt flank)		 
AAGUCAGUCGACGUGGCUCCUGUGGCCCCAGAAAUCAAGGAUGGGUGAGACCUCUUGCACAAGUGGAAGGCGACCCAUACUUGGUUUCAGGGGCUUCCGGAAUGCAUCCCGUUUAGGACU
Get precursor sequence
Structure
        10          20        30        40        50        60
AAGUCAGUCGACGUGGC--|  UGU      A         G      GAGA   CUUGCA 
                   UCC   GGCCCC GAAAUCAAG AUGGGU    CCU      C
                   AGG   UCGGGG CUUUGGUUC UACCCA    GGA      A
UCAGGAUUUGCCCUACGUA^  CCU      A         A      GC--   AGGUGA 
.       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsNo
Tissue expression
- +
Br Ce He Ki Te
Star sequence

Oan-Mir-551-P2_5p*
mirBase accessionMIMAT0007129
Sequence 
0- GAAAUCAAGGAUGGGUGAGACCU -23
Get sequence
Mature sequence

Oan-Mir-551-P2_3p
mirBase accessionMIMAT0007130
Sequence 
39- GCGACCCAUACUUGGUUUCAG -60
Get sequence