MirGeneDB 2.1
MirGeneDB ID

Sha-Mir-551-P2

Family name MIR-551 (all species)
Seed CGACCCA
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-551-P1 
Orthologues Aca-Mir-551-P2  Ami-Mir-551-P2  Bta-Mir-551-P2  Cfa-Mir-551-P2  Cli-Mir-551-P2  Cmi-Mir-551-P2  Cpi-Mir-551-P2  Cpo-Mir-551-P2  Dno-Mir-551-P2  Dre-Mir-551-P2  Ete-Mir-551-P2  Gga-Mir-551-P2  Gja-Mir-551-P2  Gmo-Mir-551-P2  Hsa-Mir-551-P2  Lch-Mir-551-P2  Loc-Mir-551-P2  Mal-Mir-551-P2  Mdo-Mir-551-P2  Mml-Mir-551-P2  Mmu-Mir-551-P2  Mun-Mir-551-P2  Oan-Mir-551-P2  Ocu-Mir-551-P2  Pbv-Mir-551-P2  Rno-Mir-551-P2  Spt-Mir-551-P2  Sto-Mir-551-P2  Tgu-Mir-551-P2  Xla-Mir-551-P2a  Xla-Mir-551-P2b  Xtr-Mir-551-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 GL849911.1: 3394257-3394317 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUCUCAACUGGUGUGACUCUUGUGGCCCCAGAAAUCAAGGAUGGGUGAGACCUCGUGUGCAAACUGAAAGGCGACCCAUACUUGGUUUCAGGGGCUUCGAGAACAUCGUUUUUAAAUGGGA
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Structure
        10          20        30        40        50        60 
AUCUCAACUGGUGUGAC--|    U      A         G      GAGA   CGUGUGC 
                   UCUUG GGCCCC GAAAUCAAG AUGGGU    CCU       \
                   AGAGC UCGGGG CUUUGGUUC UACCCA    GGA       A
AGGGUAAAUUUUUGCUACA^    U      A         A      GC--   AAGUCAA 
 .       110       100        90        80          70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-551-P2_5p*
mirBase accessionNone
Sequence 
0- GAAAUCAAGGAUGGGUGAGACCU -23
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Mature sequence

Sha-Mir-551-P2_3p
mirBase accessionNone
Sequence 
40- GCGACCCAUACUUGGUUUCAG -61
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